Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcb1Q9Z0H3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcb1Q9Z0H3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.48■□□□□ 0.71
Smarcb1Q9Z0H3 Gm37856-201ENSMUST00000191634 999 ntBASIC19.48■□□□□ 0.71
Smarcb1Q9Z0H3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcb1Q9Z0H3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcb1Q9Z0H3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcb1Q9Z0H3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcb1Q9Z0H3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcb1Q9Z0H3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Smarcb1Q9Z0H3 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.48■□□□□ 0.71
Smarcb1Q9Z0H3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcb1Q9Z0H3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcb1Q9Z0H3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcb1Q9Z0H3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Smarcb1Q9Z0H3 Gm44549-201ENSMUST00000208351 577 ntBASIC19.47■□□□□ 0.71
Smarcb1Q9Z0H3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.47■□□□□ 0.71
Smarcb1Q9Z0H3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcb1Q9Z0H3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Smarcb1Q9Z0H3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcb1Q9Z0H3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcb1Q9Z0H3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcb1Q9Z0H3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcb1Q9Z0H3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcb1Q9Z0H3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcb1Q9Z0H3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.46■□□□□ 0.71
Smarcb1Q9Z0H3 Gm22240-201ENSMUST00000175225 82 ntBASIC19.46■□□□□ 0.71
Smarcb1Q9Z0H3 Gm2559-201ENSMUST00000201323 363 ntBASIC19.46■□□□□ 0.71
Smarcb1Q9Z0H3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcb1Q9Z0H3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcb1Q9Z0H3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Smarcb1Q9Z0H3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcb1Q9Z0H3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcb1Q9Z0H3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcb1Q9Z0H3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcb1Q9Z0H3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcb1Q9Z0H3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcb1Q9Z0H3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcb1Q9Z0H3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcb1Q9Z0H3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcb1Q9Z0H3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcb1Q9Z0H3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcb1Q9Z0H3 Trmt13-210ENSMUST00000198454 880 ntBASIC19.45■□□□□ 0.7
Smarcb1Q9Z0H3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Smarcb1Q9Z0H3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcb1Q9Z0H3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.45■□□□□ 0.7
Smarcb1Q9Z0H3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcb1Q9Z0H3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcb1Q9Z0H3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcb1Q9Z0H3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcb1Q9Z0H3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcb1Q9Z0H3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcb1Q9Z0H3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcb1Q9Z0H3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcb1Q9Z0H3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcb1Q9Z0H3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcb1Q9Z0H3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcb1Q9Z0H3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcb1Q9Z0H3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcb1Q9Z0H3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcb1Q9Z0H3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcb1Q9Z0H3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcb1Q9Z0H3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Smarcb1Q9Z0H3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcb1Q9Z0H3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.43■□□□□ 0.7
Smarcb1Q9Z0H3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcb1Q9Z0H3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcb1Q9Z0H3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcb1Q9Z0H3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcb1Q9Z0H3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcb1Q9Z0H3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Smarcb1Q9Z0H3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcb1Q9Z0H3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcb1Q9Z0H3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcb1Q9Z0H3 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.42■□□□□ 0.7
Smarcb1Q9Z0H3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcb1Q9Z0H3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcb1Q9Z0H3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcb1Q9Z0H3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcb1Q9Z0H3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smarcb1Q9Z0H3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Smarcb1Q9Z0H3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcb1Q9Z0H3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcb1Q9Z0H3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcb1Q9Z0H3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Smarcb1Q9Z0H3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcb1Q9Z0H3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcb1Q9Z0H3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcb1Q9Z0H3 Gm12896-201ENSMUST00000118430 226 ntBASIC19.41■□□□□ 0.7
Smarcb1Q9Z0H3 Gm13168-201ENSMUST00000121771 632 ntBASIC19.41■□□□□ 0.7
Smarcb1Q9Z0H3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcb1Q9Z0H3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smarcb1Q9Z0H3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.41■□□□□ 0.7
Smarcb1Q9Z0H3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcb1Q9Z0H3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcb1Q9Z0H3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcb1Q9Z0H3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcb1Q9Z0H3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Smarcb1Q9Z0H3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smarcb1Q9Z0H3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms