Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm20049-201ENSMUST00000219950 730 ntBASIC18.99■□□□□ 0.63
Scn8aQ9WTU3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn8aQ9WTU3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn8aQ9WTU3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.99■□□□□ 0.63
Scn8aQ9WTU3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn8aQ9WTU3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn8aQ9WTU3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn8aQ9WTU3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn8aQ9WTU3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scn8aQ9WTU3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.98■□□□□ 0.63
Scn8aQ9WTU3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn8aQ9WTU3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Scn8aQ9WTU3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn8aQ9WTU3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn8aQ9WTU3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scn8aQ9WTU3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn8aQ9WTU3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn8aQ9WTU3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn8aQ9WTU3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.97■□□□□ 0.63
Scn8aQ9WTU3 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.97■□□□□ 0.63
Scn8aQ9WTU3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn8aQ9WTU3 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.97■□□□□ 0.63
Scn8aQ9WTU3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn8aQ9WTU3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn8aQ9WTU3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn8aQ9WTU3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn8aQ9WTU3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Scn8aQ9WTU3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn8aQ9WTU3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn8aQ9WTU3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn8aQ9WTU3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Scn8aQ9WTU3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn8aQ9WTU3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn8aQ9WTU3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Scn8aQ9WTU3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn8aQ9WTU3 Gm37856-201ENSMUST00000191634 999 ntBASIC18.96■□□□□ 0.63
Scn8aQ9WTU3 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.96■□□□□ 0.63
Scn8aQ9WTU3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn8aQ9WTU3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn8aQ9WTU3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn8aQ9WTU3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn8aQ9WTU3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.95■□□□□ 0.62
Scn8aQ9WTU3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.95■□□□□ 0.62
Scn8aQ9WTU3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn8aQ9WTU3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn8aQ9WTU3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn8aQ9WTU3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn8aQ9WTU3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn8aQ9WTU3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scn8aQ9WTU3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Scn8aQ9WTU3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scn8aQ9WTU3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn8aQ9WTU3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn8aQ9WTU3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Scn8aQ9WTU3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scn8aQ9WTU3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn8aQ9WTU3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn8aQ9WTU3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn8aQ9WTU3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn8aQ9WTU3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn8aQ9WTU3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn8aQ9WTU3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.93■□□□□ 0.62
Scn8aQ9WTU3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Scn8aQ9WTU3 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.93■□□□□ 0.62
Scn8aQ9WTU3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.93■□□□□ 0.62
Scn8aQ9WTU3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn8aQ9WTU3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn8aQ9WTU3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scn8aQ9WTU3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn8aQ9WTU3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn8aQ9WTU3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Scn8aQ9WTU3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn8aQ9WTU3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn8aQ9WTU3 Dio3-201ENSMUST00000097228 1449 ntBASIC18.93■□□□□ 0.62
Scn8aQ9WTU3 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.93■□□□□ 0.62
Scn8aQ9WTU3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn8aQ9WTU3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn8aQ9WTU3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.92■□□□□ 0.62
Scn8aQ9WTU3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn8aQ9WTU3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn8aQ9WTU3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn8aQ9WTU3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn8aQ9WTU3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.92■□□□□ 0.62
Scn8aQ9WTU3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn8aQ9WTU3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Scn8aQ9WTU3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.92■□□□□ 0.62
Scn8aQ9WTU3 Gm27275-201ENSMUST00000184318 272 ntBASIC18.92■□□□□ 0.62
Scn8aQ9WTU3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn8aQ9WTU3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn8aQ9WTU3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.91■□□□□ 0.62
Scn8aQ9WTU3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn8aQ9WTU3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn8aQ9WTU3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.91■□□□□ 0.62
Scn8aQ9WTU3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.91■□□□□ 0.62
Scn8aQ9WTU3 Gm22325-201ENSMUST00000158904 308 ntBASIC18.91■□□□□ 0.62
Scn8aQ9WTU3 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.91■□□□□ 0.62
Scn8aQ9WTU3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scn8aQ9WTU3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.91■□□□□ 0.62
Scn8aQ9WTU3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn8aQ9WTU3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms