Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfwd2Q9R1A8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rfwd2Q9R1A8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rfwd2Q9R1A8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfwd2Q9R1A8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rfwd2Q9R1A8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfwd2Q9R1A8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rfwd2Q9R1A8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rfwd2Q9R1A8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.27■□□□□ 0.68
Rfwd2Q9R1A8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.27■□□□□ 0.68
Rfwd2Q9R1A8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfwd2Q9R1A8 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.27■□□□□ 0.68
Rfwd2Q9R1A8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Rfwd2Q9R1A8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rfwd2Q9R1A8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rfwd2Q9R1A8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfwd2Q9R1A8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.26■□□□□ 0.67
Rfwd2Q9R1A8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rfwd2Q9R1A8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfwd2Q9R1A8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfwd2Q9R1A8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfwd2Q9R1A8 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.26■□□□□ 0.67
Rfwd2Q9R1A8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.26■□□□□ 0.67
Rfwd2Q9R1A8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfwd2Q9R1A8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfwd2Q9R1A8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rfwd2Q9R1A8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfwd2Q9R1A8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfwd2Q9R1A8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rfwd2Q9R1A8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfwd2Q9R1A8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfwd2Q9R1A8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.25■□□□□ 0.67
Rfwd2Q9R1A8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rfwd2Q9R1A8 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.25■□□□□ 0.67
Rfwd2Q9R1A8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rfwd2Q9R1A8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfwd2Q9R1A8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfwd2Q9R1A8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rfwd2Q9R1A8 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.24■□□□□ 0.67
Rfwd2Q9R1A8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfwd2Q9R1A8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfwd2Q9R1A8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rfwd2Q9R1A8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.24■□□□□ 0.67
Rfwd2Q9R1A8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfwd2Q9R1A8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
Rfwd2Q9R1A8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rfwd2Q9R1A8 Gm43137-201ENSMUST00000198052 594 ntBASIC19.24■□□□□ 0.67
Rfwd2Q9R1A8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.24■□□□□ 0.67
Rfwd2Q9R1A8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfwd2Q9R1A8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfwd2Q9R1A8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfwd2Q9R1A8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rfwd2Q9R1A8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Rfwd2Q9R1A8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Rfwd2Q9R1A8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfwd2Q9R1A8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd2Q9R1A8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd2Q9R1A8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Rfwd2Q9R1A8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd2Q9R1A8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd2Q9R1A8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd2Q9R1A8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd2Q9R1A8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd2Q9R1A8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.23■□□□□ 0.67
Rfwd2Q9R1A8 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.23■□□□□ 0.67
Rfwd2Q9R1A8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Rfwd2Q9R1A8 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.23■□□□□ 0.67
Rfwd2Q9R1A8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rfwd2Q9R1A8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd2Q9R1A8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd2Q9R1A8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
Rfwd2Q9R1A8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd2Q9R1A8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfwd2Q9R1A8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rfwd2Q9R1A8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfwd2Q9R1A8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rfwd2Q9R1A8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfwd2Q9R1A8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfwd2Q9R1A8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Rfwd2Q9R1A8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rfwd2Q9R1A8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 166.8 ms