Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clcf1Q9QZM3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clcf1Q9QZM3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clcf1Q9QZM3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
Clcf1Q9QZM3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.96■□□□□ 0.31
Clcf1Q9QZM3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcf1Q9QZM3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcf1Q9QZM3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clcf1Q9QZM3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.96■□□□□ 0.31
Clcf1Q9QZM3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Clcf1Q9QZM3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcf1Q9QZM3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Clcf1Q9QZM3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clcf1Q9QZM3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Clcf1Q9QZM3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Clcf1Q9QZM3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcf1Q9QZM3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Clcf1Q9QZM3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clcf1Q9QZM3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcf1Q9QZM3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.95■□□□□ 0.3
Clcf1Q9QZM3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Clcf1Q9QZM3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Clcf1Q9QZM3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcf1Q9QZM3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcf1Q9QZM3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcf1Q9QZM3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcf1Q9QZM3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clcf1Q9QZM3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcf1Q9QZM3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcf1Q9QZM3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcf1Q9QZM3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Clcf1Q9QZM3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clcf1Q9QZM3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcf1Q9QZM3 Gm12933-201ENSMUST00000120203 872 ntBASIC16.94■□□□□ 0.3
Clcf1Q9QZM3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.94■□□□□ 0.3
Clcf1Q9QZM3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcf1Q9QZM3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.94■□□□□ 0.3
Clcf1Q9QZM3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcf1Q9QZM3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clcf1Q9QZM3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.94■□□□□ 0.3
Clcf1Q9QZM3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcf1Q9QZM3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clcf1Q9QZM3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clcf1Q9QZM3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcf1Q9QZM3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcf1Q9QZM3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcf1Q9QZM3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.93■□□□□ 0.3
Clcf1Q9QZM3 Gm7860-201ENSMUST00000121190 879 ntBASIC16.93■□□□□ 0.3
Clcf1Q9QZM3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcf1Q9QZM3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clcf1Q9QZM3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.93■□□□□ 0.3
Clcf1Q9QZM3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Clcf1Q9QZM3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.92■□□□□ 0.3
Clcf1Q9QZM3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcf1Q9QZM3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Clcf1Q9QZM3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcf1Q9QZM3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Clcf1Q9QZM3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Clcf1Q9QZM3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Clcf1Q9QZM3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Clcf1Q9QZM3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcf1Q9QZM3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcf1Q9QZM3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcf1Q9QZM3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcf1Q9QZM3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcf1Q9QZM3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcf1Q9QZM3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.91■□□□□ 0.3
Clcf1Q9QZM3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcf1Q9QZM3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcf1Q9QZM3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
Clcf1Q9QZM3 Gm13534-201ENSMUST00000121169 513 ntBASIC16.91■□□□□ 0.3
Clcf1Q9QZM3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Clcf1Q9QZM3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.91■□□□□ 0.3
Clcf1Q9QZM3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Clcf1Q9QZM3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.91■□□□□ 0.3
Clcf1Q9QZM3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clcf1Q9QZM3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcf1Q9QZM3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcf1Q9QZM3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcf1Q9QZM3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
Clcf1Q9QZM3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Clcf1Q9QZM3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcf1Q9QZM3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcf1Q9QZM3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcf1Q9QZM3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Clcf1Q9QZM3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Clcf1Q9QZM3 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.9■□□□□ 0.3
Clcf1Q9QZM3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcf1Q9QZM3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Clcf1Q9QZM3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Clcf1Q9QZM3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcf1Q9QZM3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.9■□□□□ 0.3
Clcf1Q9QZM3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Clcf1Q9QZM3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Clcf1Q9QZM3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcf1Q9QZM3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcf1Q9QZM3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcf1Q9QZM3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcf1Q9QZM3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Clcf1Q9QZM3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms