Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.03■□□□□ 0.64
Msh5Q9QUM7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh5Q9QUM7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh5Q9QUM7 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.02■□□□□ 0.64
Msh5Q9QUM7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh5Q9QUM7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh5Q9QUM7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Msh5Q9QUM7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh5Q9QUM7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh5Q9QUM7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Msh5Q9QUM7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh5Q9QUM7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.02■□□□□ 0.64
Msh5Q9QUM7 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.02■□□□□ 0.64
Msh5Q9QUM7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
Msh5Q9QUM7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh5Q9QUM7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Msh5Q9QUM7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Msh5Q9QUM7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Msh5Q9QUM7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Msh5Q9QUM7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Msh5Q9QUM7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.01■□□□□ 0.63
Msh5Q9QUM7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh5Q9QUM7 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Msh5Q9QUM7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Msh5Q9QUM7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh5Q9QUM7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Msh5Q9QUM7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh5Q9QUM7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Msh5Q9QUM7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Msh5Q9QUM7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh5Q9QUM7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh5Q9QUM7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh5Q9QUM7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh5Q9QUM7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh5Q9QUM7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh5Q9QUM7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh5Q9QUM7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Msh5Q9QUM7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19■□□□□ 0.63
Msh5Q9QUM7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh5Q9QUM7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh5Q9QUM7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh5Q9QUM7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Msh5Q9QUM7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Msh5Q9QUM7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
Msh5Q9QUM7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Msh5Q9QUM7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh5Q9QUM7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Gm43060-201ENSMUST00000200621 289 ntBASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh5Q9QUM7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh5Q9QUM7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
Msh5Q9QUM7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh5Q9QUM7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh5Q9QUM7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Msh5Q9QUM7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.98■□□□□ 0.63
Msh5Q9QUM7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh5Q9QUM7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Msh5Q9QUM7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.98■□□□□ 0.63
Msh5Q9QUM7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh5Q9QUM7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh5Q9QUM7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh5Q9QUM7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh5Q9QUM7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh5Q9QUM7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh5Q9QUM7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh5Q9QUM7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh5Q9QUM7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Msh5Q9QUM7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh5Q9QUM7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Msh5Q9QUM7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Msh5Q9QUM7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh5Q9QUM7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh5Q9QUM7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.97■□□□□ 0.63
Msh5Q9QUM7 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.97■□□□□ 0.63
Msh5Q9QUM7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh5Q9QUM7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh5Q9QUM7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh5Q9QUM7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Msh5Q9QUM7 Rarb-207ENSMUST00000225921 2756 ntBASIC18.97■□□□□ 0.63
Msh5Q9QUM7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.97■□□□□ 0.63
Msh5Q9QUM7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh5Q9QUM7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh5Q9QUM7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Msh5Q9QUM7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms