Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Crlf1Q9JM58 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Crlf1Q9JM58 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Crlf1Q9JM58 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Crlf1Q9JM58 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.08■□□□□ 0
Crlf1Q9JM58 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Crlf1Q9JM58 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf1Q9JM58 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf1Q9JM58 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.07■□□□□ 0
Crlf1Q9JM58 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf1Q9JM58 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Crlf1Q9JM58 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.07■□□□□ 0
Crlf1Q9JM58 Gm13559-201ENSMUST00000120476 863 ntBASIC15.07■□□□□ 0
Crlf1Q9JM58 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.07■□□□□ 0
Crlf1Q9JM58 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.07■□□□□ 0
Crlf1Q9JM58 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf1Q9JM58 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf1Q9JM58 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.07■□□□□ 0
Crlf1Q9JM58 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.07■□□□□ 0
Crlf1Q9JM58 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.07■□□□□ 0
Crlf1Q9JM58 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Crlf1Q9JM58 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf1Q9JM58 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Crlf1Q9JM58 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.06■□□□□ 0
Crlf1Q9JM58 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf1Q9JM58 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf1Q9JM58 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC15.06■□□□□ 0
Crlf1Q9JM58 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf1Q9JM58 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf1Q9JM58 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf1Q9JM58 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf1Q9JM58 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.06■□□□□ 0
Crlf1Q9JM58 Gm18101-201ENSMUST00000215769 548 ntBASIC15.06■□□□□ 0
Crlf1Q9JM58 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf1Q9JM58 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf1Q9JM58 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf1Q9JM58 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Crlf1Q9JM58 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.06■□□□□ 0
Crlf1Q9JM58 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf1Q9JM58 Flg-201ENSMUST00000050758 1488 ntBASIC15.06■□□□□ 0
Crlf1Q9JM58 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf1Q9JM58 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.06■□□□□ 0
Crlf1Q9JM58 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf1Q9JM58 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Crlf1Q9JM58 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.06■□□□□ 0
Crlf1Q9JM58 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.05■□□□□ 0
Crlf1Q9JM58 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Crlf1Q9JM58 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.05■□□□□ -0
Crlf1Q9JM58 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.05■□□□□ -0
Crlf1Q9JM58 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.05■□□□□ -0
Crlf1Q9JM58 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.05■□□□□ -0
Crlf1Q9JM58 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.05■□□□□ -0
Crlf1Q9JM58 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Crlf1Q9JM58 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Crlf1Q9JM58 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Crlf1Q9JM58 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Crlf1Q9JM58 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.05■□□□□ -0
Crlf1Q9JM58 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.05■□□□□ -0
Crlf1Q9JM58 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Crlf1Q9JM58 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Crlf1Q9JM58 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Crlf1Q9JM58 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Crlf1Q9JM58 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Crlf1Q9JM58 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Crlf1Q9JM58 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Crlf1Q9JM58 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Crlf1Q9JM58 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Crlf1Q9JM58 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Crlf1Q9JM58 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Crlf1Q9JM58 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.04■□□□□ -0
Crlf1Q9JM58 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.04■□□□□ -0
Crlf1Q9JM58 Gm11539-201ENSMUST00000119837 557 ntBASIC15.04■□□□□ -0
Crlf1Q9JM58 Gm13436-201ENSMUST00000120418 567 ntBASIC15.04■□□□□ -0
Crlf1Q9JM58 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.04■□□□□ -0
Crlf1Q9JM58 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Crlf1Q9JM58 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.04■□□□□ -0
Crlf1Q9JM58 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.04■□□□□ -0
Crlf1Q9JM58 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.04■□□□□ -0
Crlf1Q9JM58 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Crlf1Q9JM58 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Crlf1Q9JM58 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Crlf1Q9JM58 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Crlf1Q9JM58 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf1Q9JM58 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf1Q9JM58 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.03■□□□□ -0
Crlf1Q9JM58 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.03■□□□□ -0
Crlf1Q9JM58 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf1Q9JM58 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf1Q9JM58 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Crlf1Q9JM58 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.03■□□□□ -0
Crlf1Q9JM58 Gm7889-201ENSMUST00000185591 958 ntBASIC15.03■□□□□ -0
Crlf1Q9JM58 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.03■□□□□ -0
Crlf1Q9JM58 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf1Q9JM58 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf1Q9JM58 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf1Q9JM58 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Crlf1Q9JM58 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Crlf1Q9JM58 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Crlf1Q9JM58 Gm11927-201ENSMUST00000118472 759 ntBASIC15.02■□□□□ -0
Crlf1Q9JM58 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms