Protein–RNA interactions for Protein: Q9JI57

Gtf2ird1, General transcription factor II-I repeat domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird1Q9JI57 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gtf2ird1Q9JI57 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gtf2ird1Q9JI57 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gtf2ird1Q9JI57 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Gtf2ird1Q9JI57 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2ird1Q9JI57 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2ird1Q9JI57 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2ird1Q9JI57 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2ird1Q9JI57 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Gtf2ird1Q9JI57 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.07■□□□□ 0.8
Gtf2ird1Q9JI57 Gm6420-201ENSMUST00000193885 723 ntBASIC20.07■□□□□ 0.8
Gtf2ird1Q9JI57 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2ird1Q9JI57 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2ird1Q9JI57 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2ird1Q9JI57 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2ird1Q9JI57 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2ird1Q9JI57 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.06■□□□□ 0.8
Gtf2ird1Q9JI57 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Gtf2ird1Q9JI57 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2ird1Q9JI57 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2ird1Q9JI57 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Gtf2ird1Q9JI57 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Gtf2ird1Q9JI57 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2ird1Q9JI57 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2ird1Q9JI57 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2ird1Q9JI57 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2ird1Q9JI57 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Gtf2ird1Q9JI57 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2ird1Q9JI57 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2ird1Q9JI57 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf2ird1Q9JI57 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf2ird1Q9JI57 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf2ird1Q9JI57 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.05■□□□□ 0.8
Gtf2ird1Q9JI57 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Gtf2ird1Q9JI57 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf2ird1Q9JI57 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf2ird1Q9JI57 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird1Q9JI57 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird1Q9JI57 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird1Q9JI57 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird1Q9JI57 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird1Q9JI57 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird1Q9JI57 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.04■□□□□ 0.8
Gtf2ird1Q9JI57 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird1Q9JI57 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.04■□□□□ 0.8
Gtf2ird1Q9JI57 Gm29257-201ENSMUST00000186115 639 ntBASIC20.04■□□□□ 0.8
Gtf2ird1Q9JI57 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.04■□□□□ 0.8
Gtf2ird1Q9JI57 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird1Q9JI57 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.04■□□□□ 0.8
Gtf2ird1Q9JI57 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird1Q9JI57 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird1Q9JI57 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird1Q9JI57 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird1Q9JI57 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf2ird1Q9JI57 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf2ird1Q9JI57 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf2ird1Q9JI57 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf2ird1Q9JI57 Gm7290-201ENSMUST00000104990 617 ntBASIC20.03■□□□□ 0.8
Gtf2ird1Q9JI57 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf2ird1Q9JI57 Gm12918-201ENSMUST00000120234 636 ntBASIC20.03■□□□□ 0.8
Gtf2ird1Q9JI57 Gm15710-201ENSMUST00000121821 636 ntBASIC20.03■□□□□ 0.8
Gtf2ird1Q9JI57 Gm5075-201ENSMUST00000196916 622 ntBASIC20.03■□□□□ 0.8
Gtf2ird1Q9JI57 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Gtf2ird1Q9JI57 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf2ird1Q9JI57 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.03■□□□□ 0.8
Gtf2ird1Q9JI57 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.03■□□□□ 0.8
Gtf2ird1Q9JI57 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Gtf2ird1Q9JI57 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf2ird1Q9JI57 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf2ird1Q9JI57 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf2ird1Q9JI57 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf2ird1Q9JI57 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf2ird1Q9JI57 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.02■□□□□ 0.8
Gtf2ird1Q9JI57 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf2ird1Q9JI57 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Gtf2ird1Q9JI57 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf2ird1Q9JI57 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf2ird1Q9JI57 Nespas-201ENSMUST00000143738 1083 ntBASIC20.02■□□□□ 0.8
Gtf2ird1Q9JI57 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf2ird1Q9JI57 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf2ird1Q9JI57 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf2ird1Q9JI57 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf2ird1Q9JI57 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf2ird1Q9JI57 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Gtf2ird1Q9JI57 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gtf2ird1Q9JI57 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gtf2ird1Q9JI57 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gtf2ird1Q9JI57 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf2ird1Q9JI57 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Gtf2ird1Q9JI57 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
Gtf2ird1Q9JI57 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf2ird1Q9JI57 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf2ird1Q9JI57 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf2ird1Q9JI57 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf2ird1Q9JI57 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf2ird1Q9JI57 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.01■□□□□ 0.79
Gtf2ird1Q9JI57 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf2ird1Q9JI57 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.01■□□□□ 0.79
Gtf2ird1Q9JI57 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf2ird1Q9JI57 Gm10602-201ENSMUST00000098239 609 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms