Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.99■□□□□ 0.47
Ube4bQ9ES00 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.99■□□□□ 0.47
Ube4bQ9ES00 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.99■□□□□ 0.47
Ube4bQ9ES00 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.99■□□□□ 0.47
Ube4bQ9ES00 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ube4bQ9ES00 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ube4bQ9ES00 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.99■□□□□ 0.47
Ube4bQ9ES00 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ube4bQ9ES00 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ube4bQ9ES00 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ube4bQ9ES00 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ube4bQ9ES00 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ube4bQ9ES00 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ube4bQ9ES00 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ube4bQ9ES00 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.99■□□□□ 0.47
Ube4bQ9ES00 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.99■□□□□ 0.47
Ube4bQ9ES00 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ube4bQ9ES00 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ube4bQ9ES00 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ube4bQ9ES00 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ube4bQ9ES00 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.98■□□□□ 0.47
Ube4bQ9ES00 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ube4bQ9ES00 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ube4bQ9ES00 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ube4bQ9ES00 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ube4bQ9ES00 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Ube4bQ9ES00 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ube4bQ9ES00 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ube4bQ9ES00 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ube4bQ9ES00 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ube4bQ9ES00 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ube4bQ9ES00 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ube4bQ9ES00 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube4bQ9ES00 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ube4bQ9ES00 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube4bQ9ES00 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Ube4bQ9ES00 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube4bQ9ES00 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ube4bQ9ES00 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ube4bQ9ES00 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.97■□□□□ 0.47
Ube4bQ9ES00 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube4bQ9ES00 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube4bQ9ES00 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ube4bQ9ES00 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube4bQ9ES00 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube4bQ9ES00 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ube4bQ9ES00 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ube4bQ9ES00 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ube4bQ9ES00 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.96■□□□□ 0.47
Ube4bQ9ES00 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube4bQ9ES00 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ube4bQ9ES00 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube4bQ9ES00 Gm40881-201ENSMUST00000223397 166 ntBASIC17.96■□□□□ 0.47
Ube4bQ9ES00 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ube4bQ9ES00 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
Ube4bQ9ES00 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ube4bQ9ES00 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ube4bQ9ES00 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4bQ9ES00 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4bQ9ES00 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4bQ9ES00 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ube4bQ9ES00 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4bQ9ES00 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4bQ9ES00 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4bQ9ES00 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Ube4bQ9ES00 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.95■□□□□ 0.46
Ube4bQ9ES00 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4bQ9ES00 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4bQ9ES00 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4bQ9ES00 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4bQ9ES00 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4bQ9ES00 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ube4bQ9ES00 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ube4bQ9ES00 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ube4bQ9ES00 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4bQ9ES00 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4bQ9ES00 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4bQ9ES00 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4bQ9ES00 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4bQ9ES00 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4bQ9ES00 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4bQ9ES00 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ube4bQ9ES00 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4bQ9ES00 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ube4bQ9ES00 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube4bQ9ES00 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube4bQ9ES00 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube4bQ9ES00 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube4bQ9ES00 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube4bQ9ES00 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ube4bQ9ES00 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube4bQ9ES00 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.93■□□□□ 0.46
Ube4bQ9ES00 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ube4bQ9ES00 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.93■□□□□ 0.46
Ube4bQ9ES00 Gm5812-201ENSMUST00000061073 957 ntBASIC17.93■□□□□ 0.46
Ube4bQ9ES00 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ube4bQ9ES00 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ube4bQ9ES00 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4bQ9ES00 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms