Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Rtp4Q9ER80 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.52■□□□□ 0.4
Rtp4Q9ER80 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Rtp4Q9ER80 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.52■□□□□ 0.4
Rtp4Q9ER80 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rtp4Q9ER80 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Rtp4Q9ER80 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rtp4Q9ER80 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rtp4Q9ER80 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rtp4Q9ER80 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rtp4Q9ER80 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rtp4Q9ER80 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rtp4Q9ER80 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Rtp4Q9ER80 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rtp4Q9ER80 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rtp4Q9ER80 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
Rtp4Q9ER80 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.5■□□□□ 0.39
Rtp4Q9ER80 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtp4Q9ER80 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.5■□□□□ 0.39
Rtp4Q9ER80 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtp4Q9ER80 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Rtp4Q9ER80 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rtp4Q9ER80 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.5■□□□□ 0.39
Rtp4Q9ER80 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rtp4Q9ER80 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtp4Q9ER80 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtp4Q9ER80 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtp4Q9ER80 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.49■□□□□ 0.39
Rtp4Q9ER80 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtp4Q9ER80 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rtp4Q9ER80 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.49■□□□□ 0.39
Rtp4Q9ER80 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.49■□□□□ 0.39
Rtp4Q9ER80 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.49■□□□□ 0.39
Rtp4Q9ER80 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rtp4Q9ER80 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtp4Q9ER80 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rtp4Q9ER80 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rtp4Q9ER80 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtp4Q9ER80 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rtp4Q9ER80 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rtp4Q9ER80 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtp4Q9ER80 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtp4Q9ER80 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Rtp4Q9ER80 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtp4Q9ER80 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtp4Q9ER80 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtp4Q9ER80 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtp4Q9ER80 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtp4Q9ER80 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.48■□□□□ 0.39
Rtp4Q9ER80 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtp4Q9ER80 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.48■□□□□ 0.39
Rtp4Q9ER80 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtp4Q9ER80 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rtp4Q9ER80 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtp4Q9ER80 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rtp4Q9ER80 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtp4Q9ER80 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtp4Q9ER80 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rtp4Q9ER80 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Rtp4Q9ER80 Gm13146-201ENSMUST00000118508 780 ntBASIC17.47■□□□□ 0.39
Rtp4Q9ER80 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.47■□□□□ 0.39
Rtp4Q9ER80 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.47■□□□□ 0.39
Rtp4Q9ER80 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rtp4Q9ER80 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rtp4Q9ER80 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtp4Q9ER80 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtp4Q9ER80 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtp4Q9ER80 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtp4Q9ER80 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.46■□□□□ 0.39
Rtp4Q9ER80 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rtp4Q9ER80 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.46■□□□□ 0.39
Rtp4Q9ER80 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtp4Q9ER80 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtp4Q9ER80 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtp4Q9ER80 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtp4Q9ER80 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtp4Q9ER80 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtp4Q9ER80 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rtp4Q9ER80 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtp4Q9ER80 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms