Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn3Q9DCB1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hmgn3Q9DCB1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.6■□□□□ 0.41
Hmgn3Q9DCB1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn3Q9DCB1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn3Q9DCB1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn3Q9DCB1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn3Q9DCB1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn3Q9DCB1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn3Q9DCB1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn3Q9DCB1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.6■□□□□ 0.41
Hmgn3Q9DCB1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.6■□□□□ 0.41
Hmgn3Q9DCB1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.6■□□□□ 0.41
Hmgn3Q9DCB1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Hmgn3Q9DCB1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.6■□□□□ 0.41
Hmgn3Q9DCB1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn3Q9DCB1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn3Q9DCB1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.6■□□□□ 0.41
Hmgn3Q9DCB1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn3Q9DCB1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hmgn3Q9DCB1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Hmgn3Q9DCB1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn3Q9DCB1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn3Q9DCB1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn3Q9DCB1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn3Q9DCB1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn3Q9DCB1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.59■□□□□ 0.41
Hmgn3Q9DCB1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn3Q9DCB1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.59■□□□□ 0.41
Hmgn3Q9DCB1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn3Q9DCB1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn3Q9DCB1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn3Q9DCB1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn3Q9DCB1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn3Q9DCB1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn3Q9DCB1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hmgn3Q9DCB1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Hmgn3Q9DCB1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
Hmgn3Q9DCB1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Hmgn3Q9DCB1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hmgn3Q9DCB1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Hmgn3Q9DCB1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Hmgn3Q9DCB1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmgn3Q9DCB1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmgn3Q9DCB1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmgn3Q9DCB1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Hmgn3Q9DCB1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Hmgn3Q9DCB1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmgn3Q9DCB1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hmgn3Q9DCB1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgn3Q9DCB1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hmgn3Q9DCB1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgn3Q9DCB1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgn3Q9DCB1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgn3Q9DCB1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgn3Q9DCB1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgn3Q9DCB1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hmgn3Q9DCB1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hmgn3Q9DCB1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgn3Q9DCB1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hmgn3Q9DCB1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.57■□□□□ 0.4
Hmgn3Q9DCB1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgn3Q9DCB1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.57■□□□□ 0.4
Hmgn3Q9DCB1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hmgn3Q9DCB1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn3Q9DCB1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn3Q9DCB1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn3Q9DCB1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn3Q9DCB1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn3Q9DCB1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn3Q9DCB1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn3Q9DCB1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.56■□□□□ 0.4
Hmgn3Q9DCB1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn3Q9DCB1 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.56■□□□□ 0.4
Hmgn3Q9DCB1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn3Q9DCB1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn3Q9DCB1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn3Q9DCB1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.56■□□□□ 0.4
Hmgn3Q9DCB1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hmgn3Q9DCB1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.56■□□□□ 0.4
Hmgn3Q9DCB1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn3Q9DCB1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn3Q9DCB1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn3Q9DCB1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn3Q9DCB1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.55■□□□□ 0.4
Hmgn3Q9DCB1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hmgn3Q9DCB1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.55■□□□□ 0.4
Hmgn3Q9DCB1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.55■□□□□ 0.4
Hmgn3Q9DCB1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn3Q9DCB1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Hmgn3Q9DCB1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn3Q9DCB1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn3Q9DCB1 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.55■□□□□ 0.4
Hmgn3Q9DCB1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hmgn3Q9DCB1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn3Q9DCB1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn3Q9DCB1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn3Q9DCB1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmgn3Q9DCB1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgn3Q9DCB1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms