Protein–RNA interactions for Protein: Q9D7U6

Cldn22, Claudin-22, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn22Q9D7U6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn22Q9D7U6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn22Q9D7U6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn22Q9D7U6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cldn22Q9D7U6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cldn22Q9D7U6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn22Q9D7U6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn22Q9D7U6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn22Q9D7U6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.82■□□□□ 0.6
Cldn22Q9D7U6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn22Q9D7U6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn22Q9D7U6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Cldn22Q9D7U6 AA386476-201ENSMUST00000098781 1665 ntBASIC18.82■□□□□ 0.6
Cldn22Q9D7U6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn22Q9D7U6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn22Q9D7U6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn22Q9D7U6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn22Q9D7U6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.81■□□□□ 0.6
Cldn22Q9D7U6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn22Q9D7U6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn22Q9D7U6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cldn22Q9D7U6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn22Q9D7U6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn22Q9D7U6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn22Q9D7U6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn22Q9D7U6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cldn22Q9D7U6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn22Q9D7U6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn22Q9D7U6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn22Q9D7U6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn22Q9D7U6 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.8■□□□□ 0.6
Cldn22Q9D7U6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.8■□□□□ 0.6
Cldn22Q9D7U6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.8■□□□□ 0.6
Cldn22Q9D7U6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn22Q9D7U6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn22Q9D7U6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn22Q9D7U6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn22Q9D7U6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn22Q9D7U6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn22Q9D7U6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 Rarb-207ENSMUST00000225921 2756 ntBASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn22Q9D7U6 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.78■□□□□ 0.6
Cldn22Q9D7U6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.78■□□□□ 0.6
Cldn22Q9D7U6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn22Q9D7U6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn22Q9D7U6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn22Q9D7U6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn22Q9D7U6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn22Q9D7U6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn22Q9D7U6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn22Q9D7U6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn22Q9D7U6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.78■□□□□ 0.6
Cldn22Q9D7U6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn22Q9D7U6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn22Q9D7U6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn22Q9D7U6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cldn22Q9D7U6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cldn22Q9D7U6 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.77■□□□□ 0.6
Cldn22Q9D7U6 Grk6-206ENSMUST00000224995 2971 ntBASIC18.77■□□□□ 0.6
Cldn22Q9D7U6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn22Q9D7U6 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.77■□□□□ 0.6
Cldn22Q9D7U6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.77■□□□□ 0.59
Cldn22Q9D7U6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cldn22Q9D7U6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn22Q9D7U6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cldn22Q9D7U6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn22Q9D7U6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.76■□□□□ 0.59
Cldn22Q9D7U6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.76■□□□□ 0.59
Cldn22Q9D7U6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn22Q9D7U6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn22Q9D7U6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Cldn22Q9D7U6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn22Q9D7U6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn22Q9D7U6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn22Q9D7U6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.76■□□□□ 0.59
Cldn22Q9D7U6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cldn22Q9D7U6 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.75■□□□□ 0.59
Cldn22Q9D7U6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms