Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.74■□□□□ 0.91
Rpap3Q9D706 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rpap3Q9D706 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.74■□□□□ 0.91
Rpap3Q9D706 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpap3Q9D706 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rpap3Q9D706 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rpap3Q9D706 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rpap3Q9D706 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rpap3Q9D706 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap3Q9D706 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap3Q9D706 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap3Q9D706 Gm37856-201ENSMUST00000191634 999 ntBASIC20.73■□□□□ 0.91
Rpap3Q9D706 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.73■□□□□ 0.91
Rpap3Q9D706 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rpap3Q9D706 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Rpap3Q9D706 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap3Q9D706 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rpap3Q9D706 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rpap3Q9D706 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Rpap3Q9D706 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpap3Q9D706 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpap3Q9D706 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rpap3Q9D706 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpap3Q9D706 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rpap3Q9D706 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpap3Q9D706 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rpap3Q9D706 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rpap3Q9D706 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rpap3Q9D706 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpap3Q9D706 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.71■□□□□ 0.91
Rpap3Q9D706 Gm8520-201ENSMUST00000186517 868 ntBASIC20.71■□□□□ 0.91
Rpap3Q9D706 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.71■□□□□ 0.91
Rpap3Q9D706 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpap3Q9D706 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rpap3Q9D706 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpap3Q9D706 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpap3Q9D706 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Rpap3Q9D706 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpap3Q9D706 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpap3Q9D706 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpap3Q9D706 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpap3Q9D706 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpap3Q9D706 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rpap3Q9D706 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.7■□□□□ 0.9
Rpap3Q9D706 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.7■□□□□ 0.9
Rpap3Q9D706 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpap3Q9D706 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.7■□□□□ 0.9
Rpap3Q9D706 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpap3Q9D706 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.69■□□□□ 0.9
Rpap3Q9D706 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap3Q9D706 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Rpap3Q9D706 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap3Q9D706 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap3Q9D706 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap3Q9D706 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Rpap3Q9D706 Trmt13-210ENSMUST00000198454 880 ntBASIC20.69■□□□□ 0.9
Rpap3Q9D706 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap3Q9D706 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap3Q9D706 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.69■□□□□ 0.9
Rpap3Q9D706 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap3Q9D706 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap3Q9D706 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.69■□□□□ 0.9
Rpap3Q9D706 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpap3Q9D706 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpap3Q9D706 Gm44549-201ENSMUST00000208351 577 ntBASIC20.68■□□□□ 0.9
Rpap3Q9D706 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpap3Q9D706 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rpap3Q9D706 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpap3Q9D706 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpap3Q9D706 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rpap3Q9D706 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.67■□□□□ 0.9
Rpap3Q9D706 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rpap3Q9D706 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpap3Q9D706 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rpap3Q9D706 Gm22240-201ENSMUST00000175225 82 ntBASIC20.67■□□□□ 0.9
Rpap3Q9D706 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rpap3Q9D706 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpap3Q9D706 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpap3Q9D706 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpap3Q9D706 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpap3Q9D706 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpap3Q9D706 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap3Q9D706 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap3Q9D706 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap3Q9D706 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rpap3Q9D706 Gm2559-201ENSMUST00000201323 363 ntBASIC20.66■□□□□ 0.9
Rpap3Q9D706 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.66■□□□□ 0.9
Rpap3Q9D706 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.66■□□□□ 0.9
Rpap3Q9D706 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rpap3Q9D706 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.66■□□□□ 0.9
Rpap3Q9D706 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap3Q9D706 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap3Q9D706 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap3Q9D706 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rpap3Q9D706 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpap3Q9D706 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Rpap3Q9D706 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap3Q9D706 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap3Q9D706 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.65■□□□□ 0.9
Rpap3Q9D706 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms