Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim42Q9D2H5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim42Q9D2H5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim42Q9D2H5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim42Q9D2H5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Trim42Q9D2H5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim42Q9D2H5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim42Q9D2H5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim42Q9D2H5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim42Q9D2H5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim42Q9D2H5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim42Q9D2H5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim42Q9D2H5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.71■□□□□ 0.59
Trim42Q9D2H5 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim42Q9D2H5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Trim42Q9D2H5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim42Q9D2H5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim42Q9D2H5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim42Q9D2H5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim42Q9D2H5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim42Q9D2H5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim42Q9D2H5 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.71■□□□□ 0.59
Trim42Q9D2H5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trim42Q9D2H5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim42Q9D2H5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim42Q9D2H5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim42Q9D2H5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim42Q9D2H5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.7■□□□□ 0.58
Trim42Q9D2H5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim42Q9D2H5 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim42Q9D2H5 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim42Q9D2H5 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim42Q9D2H5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim42Q9D2H5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim42Q9D2H5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim42Q9D2H5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim42Q9D2H5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim42Q9D2H5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim42Q9D2H5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim42Q9D2H5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim42Q9D2H5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim42Q9D2H5 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.69■□□□□ 0.58
Trim42Q9D2H5 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.69■□□□□ 0.58
Trim42Q9D2H5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim42Q9D2H5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim42Q9D2H5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim42Q9D2H5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim42Q9D2H5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim42Q9D2H5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim42Q9D2H5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim42Q9D2H5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim42Q9D2H5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim42Q9D2H5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Trim42Q9D2H5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.68■□□□□ 0.58
Trim42Q9D2H5 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim42Q9D2H5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim42Q9D2H5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim42Q9D2H5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim42Q9D2H5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim42Q9D2H5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim42Q9D2H5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim42Q9D2H5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim42Q9D2H5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim42Q9D2H5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim42Q9D2H5 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim42Q9D2H5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim42Q9D2H5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim42Q9D2H5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Trim42Q9D2H5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim42Q9D2H5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim42Q9D2H5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim42Q9D2H5 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.67■□□□□ 0.58
Trim42Q9D2H5 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.67■□□□□ 0.58
Trim42Q9D2H5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim42Q9D2H5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim42Q9D2H5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim42Q9D2H5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim42Q9D2H5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim42Q9D2H5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim42Q9D2H5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim42Q9D2H5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim42Q9D2H5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trim42Q9D2H5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.66■□□□□ 0.58
Trim42Q9D2H5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim42Q9D2H5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Trim42Q9D2H5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim42Q9D2H5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim42Q9D2H5 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim42Q9D2H5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim42Q9D2H5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim42Q9D2H5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim42Q9D2H5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim42Q9D2H5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trim42Q9D2H5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim42Q9D2H5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim42Q9D2H5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim42Q9D2H5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim42Q9D2H5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim42Q9D2H5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Trim42Q9D2H5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms