Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Upk1aQ9D132 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Upk1aQ9D132 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Upk1aQ9D132 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Upk1aQ9D132 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Upk1aQ9D132 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Upk1aQ9D132 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Upk1aQ9D132 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Upk1aQ9D132 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.78■□□□□ 0.44
Upk1aQ9D132 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Upk1aQ9D132 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Upk1aQ9D132 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.77■□□□□ 0.44
Upk1aQ9D132 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Upk1aQ9D132 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Upk1aQ9D132 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Upk1aQ9D132 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Upk1aQ9D132 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Upk1aQ9D132 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.77■□□□□ 0.44
Upk1aQ9D132 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.77■□□□□ 0.44
Upk1aQ9D132 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.77■□□□□ 0.44
Upk1aQ9D132 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Upk1aQ9D132 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Upk1aQ9D132 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Upk1aQ9D132 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk1aQ9D132 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk1aQ9D132 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk1aQ9D132 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk1aQ9D132 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk1aQ9D132 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Upk1aQ9D132 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk1aQ9D132 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Upk1aQ9D132 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk1aQ9D132 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk1aQ9D132 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk1aQ9D132 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Upk1aQ9D132 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Upk1aQ9D132 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Upk1aQ9D132 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk1aQ9D132 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Upk1aQ9D132 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk1aQ9D132 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upk1aQ9D132 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upk1aQ9D132 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upk1aQ9D132 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Upk1aQ9D132 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.75■□□□□ 0.43
Upk1aQ9D132 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upk1aQ9D132 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upk1aQ9D132 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upk1aQ9D132 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.75■□□□□ 0.43
Upk1aQ9D132 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upk1aQ9D132 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Upk1aQ9D132 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.74■□□□□ 0.43
Upk1aQ9D132 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Upk1aQ9D132 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.73■□□□□ 0.43
Upk1aQ9D132 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.73■□□□□ 0.43
Upk1aQ9D132 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Upk1aQ9D132 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upk1aQ9D132 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Upk1aQ9D132 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Upk1aQ9D132 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Upk1aQ9D132 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upk1aQ9D132 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Upk1aQ9D132 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upk1aQ9D132 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.73■□□□□ 0.43
Upk1aQ9D132 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upk1aQ9D132 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.73■□□□□ 0.43
Upk1aQ9D132 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upk1aQ9D132 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upk1aQ9D132 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upk1aQ9D132 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upk1aQ9D132 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upk1aQ9D132 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upk1aQ9D132 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Upk1aQ9D132 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Upk1aQ9D132 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upk1aQ9D132 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upk1aQ9D132 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upk1aQ9D132 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Upk1aQ9D132 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.72■□□□□ 0.43
Upk1aQ9D132 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upk1aQ9D132 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upk1aQ9D132 Fst-202ENSMUST00000223640 2612 ntBASIC17.72■□□□□ 0.43
Upk1aQ9D132 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upk1aQ9D132 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Upk1aQ9D132 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upk1aQ9D132 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.72■□□□□ 0.43
Upk1aQ9D132 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Upk1aQ9D132 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Upk1aQ9D132 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Upk1aQ9D132 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Upk1aQ9D132 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.71■□□□□ 0.43
Upk1aQ9D132 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.71■□□□□ 0.43
Upk1aQ9D132 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Upk1aQ9D132 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Upk1aQ9D132 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Upk1aQ9D132 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Upk1aQ9D132 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Upk1aQ9D132 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Upk1aQ9D132 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.71■□□□□ 0.42
Upk1aQ9D132 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms