Protein–RNA interactions for Protein: Q9CWN7

Cnot11, CCR4-NOT transcription complex subunit 11, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot11Q9CWN7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnot11Q9CWN7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnot11Q9CWN7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnot11Q9CWN7 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.23■□□□□ 0.51
Cnot11Q9CWN7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnot11Q9CWN7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cnot11Q9CWN7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cnot11Q9CWN7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cnot11Q9CWN7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnot11Q9CWN7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnot11Q9CWN7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnot11Q9CWN7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cnot11Q9CWN7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnot11Q9CWN7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cnot11Q9CWN7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnot11Q9CWN7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.22■□□□□ 0.51
Cnot11Q9CWN7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.22■□□□□ 0.51
Cnot11Q9CWN7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cnot11Q9CWN7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
Cnot11Q9CWN7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cnot11Q9CWN7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnot11Q9CWN7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnot11Q9CWN7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnot11Q9CWN7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.21■□□□□ 0.51
Cnot11Q9CWN7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnot11Q9CWN7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnot11Q9CWN7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cnot11Q9CWN7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnot11Q9CWN7 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.21■□□□□ 0.51
Cnot11Q9CWN7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnot11Q9CWN7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnot11Q9CWN7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnot11Q9CWN7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.21■□□□□ 0.51
Cnot11Q9CWN7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnot11Q9CWN7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnot11Q9CWN7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cnot11Q9CWN7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnot11Q9CWN7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.2■□□□□ 0.5
Cnot11Q9CWN7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cnot11Q9CWN7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cnot11Q9CWN7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnot11Q9CWN7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot11Q9CWN7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot11Q9CWN7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot11Q9CWN7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Cnot11Q9CWN7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot11Q9CWN7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.19■□□□□ 0.5
Cnot11Q9CWN7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot11Q9CWN7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot11Q9CWN7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot11Q9CWN7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot11Q9CWN7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot11Q9CWN7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot11Q9CWN7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot11Q9CWN7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot11Q9CWN7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.19■□□□□ 0.5
Cnot11Q9CWN7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot11Q9CWN7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnot11Q9CWN7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot11Q9CWN7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cnot11Q9CWN7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.18■□□□□ 0.5
Cnot11Q9CWN7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.18■□□□□ 0.5
Cnot11Q9CWN7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot11Q9CWN7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.18■□□□□ 0.5
Cnot11Q9CWN7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.18■□□□□ 0.5
Cnot11Q9CWN7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.18■□□□□ 0.5
Cnot11Q9CWN7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot11Q9CWN7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot11Q9CWN7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot11Q9CWN7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot11Q9CWN7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot11Q9CWN7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnot11Q9CWN7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Cnot11Q9CWN7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot11Q9CWN7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot11Q9CWN7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot11Q9CWN7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Cnot11Q9CWN7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot11Q9CWN7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cnot11Q9CWN7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot11Q9CWN7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.17■□□□□ 0.5
Cnot11Q9CWN7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot11Q9CWN7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnot11Q9CWN7 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.17■□□□□ 0.5
Cnot11Q9CWN7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot11Q9CWN7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot11Q9CWN7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot11Q9CWN7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot11Q9CWN7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.16■□□□□ 0.5
Cnot11Q9CWN7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot11Q9CWN7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot11Q9CWN7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot11Q9CWN7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot11Q9CWN7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot11Q9CWN7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot11Q9CWN7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cnot11Q9CWN7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cnot11Q9CWN7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cnot11Q9CWN7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.15■□□□□ 0.5
Cnot11Q9CWN7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms