Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Gm7290-201ENSMUST00000104990 617 ntBASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Gm12918-201ENSMUST00000120234 636 ntBASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Gm15710-201ENSMUST00000121821 636 ntBASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Gm5075-201ENSMUST00000196916 622 ntBASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Otud1Q9CUB6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Otud1Q9CUB6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Otud1Q9CUB6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Otud1Q9CUB6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Otud1Q9CUB6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Otud1Q9CUB6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Otud1Q9CUB6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Otud1Q9CUB6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.7■□□□□ 0.42
Otud1Q9CUB6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Otud1Q9CUB6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Otud1Q9CUB6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Otud1Q9CUB6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Otud1Q9CUB6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Otud1Q9CUB6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Otud1Q9CUB6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Otud1Q9CUB6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Otud1Q9CUB6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Otud1Q9CUB6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Otud1Q9CUB6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Otud1Q9CUB6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Otud1Q9CUB6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Otud1Q9CUB6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Otud1Q9CUB6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Otud1Q9CUB6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Otud1Q9CUB6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Otud1Q9CUB6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.69■□□□□ 0.42
Otud1Q9CUB6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Otud1Q9CUB6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Otud1Q9CUB6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Otud1Q9CUB6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Otud1Q9CUB6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Otud1Q9CUB6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Otud1Q9CUB6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otud1Q9CUB6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otud1Q9CUB6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otud1Q9CUB6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otud1Q9CUB6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Otud1Q9CUB6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otud1Q9CUB6 Gm27011-201ENSMUST00000182352 972 ntBASIC17.68■□□□□ 0.42
Otud1Q9CUB6 Gm5408-201ENSMUST00000197998 747 ntBASIC17.68■□□□□ 0.42
Otud1Q9CUB6 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.68■□□□□ 0.42
Otud1Q9CUB6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otud1Q9CUB6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otud1Q9CUB6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otud1Q9CUB6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otud1Q9CUB6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Otud1Q9CUB6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otud1Q9CUB6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otud1Q9CUB6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Otud1Q9CUB6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otud1Q9CUB6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.67■□□□□ 0.42
Otud1Q9CUB6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otud1Q9CUB6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otud1Q9CUB6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otud1Q9CUB6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otud1Q9CUB6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.67■□□□□ 0.42
Otud1Q9CUB6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Otud1Q9CUB6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otud1Q9CUB6 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.67■□□□□ 0.42
Otud1Q9CUB6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otud1Q9CUB6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otud1Q9CUB6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Otud1Q9CUB6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Otud1Q9CUB6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otud1Q9CUB6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Otud1Q9CUB6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Otud1Q9CUB6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.66■□□□□ 0.42
Otud1Q9CUB6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Otud1Q9CUB6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.66■□□□□ 0.42
Otud1Q9CUB6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Otud1Q9CUB6 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.66■□□□□ 0.42
Otud1Q9CUB6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otud1Q9CUB6 Gm4968-201ENSMUST00000071458 858 ntBASIC17.66■□□□□ 0.42
Otud1Q9CUB6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otud1Q9CUB6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otud1Q9CUB6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otud1Q9CUB6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otud1Q9CUB6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otud1Q9CUB6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Otud1Q9CUB6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otud1Q9CUB6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms