Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CR55 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CR55 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CR55 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CR55 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Q9CR55 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q9CR55 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Q9CR55 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.33■□□□□ 0.37
Q9CR55 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.33■□□□□ 0.37
Q9CR55 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q9CR55 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q9CR55 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q9CR55 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q9CR55 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q9CR55 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q9CR55 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.33■□□□□ 0.36
Q9CR55 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q9CR55 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q9CR55 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q9CR55 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Q9CR55 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.32■□□□□ 0.36
Q9CR55 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q9CR55 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Q9CR55 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Q9CR55 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q9CR55 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q9CR55 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.32■□□□□ 0.36
Q9CR55 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q9CR55 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q9CR55 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Q9CR55 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q9CR55 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q9CR55 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q9CR55 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q9CR55 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Q9CR55 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q9CR55 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q9CR55 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Q9CR55 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.31■□□□□ 0.36
Q9CR55 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q9CR55 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Q9CR55 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q9CR55 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Q9CR55 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Q9CR55 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Q9CR55 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q9CR55 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Q9CR55 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q9CR55 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q9CR55 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Q9CR55 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Q9CR55 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q9CR55 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q9CR55 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Q9CR55 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q9CR55 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q9CR55 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q9CR55 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Q9CR55 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Q9CR55 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q9CR55 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.3■□□□□ 0.36
Q9CR55 Gm45102-201ENSMUST00000207427 857 ntBASIC17.3■□□□□ 0.36
Q9CR55 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Q9CR55 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q9CR55 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Q9CR55 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q9CR55 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q9CR55 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Q9CR55 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q9CR55 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Q9CR55 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q9CR55 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q9CR55 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q9CR55 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Q9CR55 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Q9CR55 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q9CR55 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q9CR55 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.29■□□□□ 0.36
Q9CR55 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Q9CR55 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q9CR55 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Q9CR55 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q9CR55 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Q9CR55 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Q9CR55 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q9CR55 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q9CR55 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q9CR55 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q9CR55 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q9CR55 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Q9CR55 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q9CR55 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q9CR55 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q9CR55 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q9CR55 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Q9CR55 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Q9CR55 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.28■□□□□ 0.36
Q9CR55 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q9CR55 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Q9CR55 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms