Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc43Q9CR29 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc43Q9CR29 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.8■□□□□ 0.92
Ccdc43Q9CR29 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc43Q9CR29 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc43Q9CR29 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ccdc43Q9CR29 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc43Q9CR29 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc43Q9CR29 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc43Q9CR29 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc43Q9CR29 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Ccdc43Q9CR29 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ccdc43Q9CR29 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.79■□□□□ 0.92
Ccdc43Q9CR29 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc43Q9CR29 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc43Q9CR29 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.79■□□□□ 0.92
Ccdc43Q9CR29 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc43Q9CR29 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc43Q9CR29 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc43Q9CR29 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc43Q9CR29 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc43Q9CR29 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc43Q9CR29 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc43Q9CR29 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc43Q9CR29 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc43Q9CR29 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc43Q9CR29 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc43Q9CR29 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc43Q9CR29 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
Ccdc43Q9CR29 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc43Q9CR29 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc43Q9CR29 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc43Q9CR29 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc43Q9CR29 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc43Q9CR29 Gm43060-201ENSMUST00000200621 289 ntBASIC20.77■□□□□ 0.92
Ccdc43Q9CR29 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc43Q9CR29 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc43Q9CR29 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc43Q9CR29 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc43Q9CR29 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Ccdc43Q9CR29 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc43Q9CR29 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc43Q9CR29 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc43Q9CR29 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc43Q9CR29 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.76■□□□□ 0.91
Ccdc43Q9CR29 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.76■□□□□ 0.91
Ccdc43Q9CR29 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ccdc43Q9CR29 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc43Q9CR29 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc43Q9CR29 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc43Q9CR29 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc43Q9CR29 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc43Q9CR29 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc43Q9CR29 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.76■□□□□ 0.91
Ccdc43Q9CR29 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc43Q9CR29 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc43Q9CR29 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc43Q9CR29 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.75■□□□□ 0.91
Ccdc43Q9CR29 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc43Q9CR29 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc43Q9CR29 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ccdc43Q9CR29 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.75■□□□□ 0.91
Ccdc43Q9CR29 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc43Q9CR29 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.75■□□□□ 0.91
Ccdc43Q9CR29 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc43Q9CR29 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.74■□□□□ 0.91
Ccdc43Q9CR29 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.74■□□□□ 0.91
Ccdc43Q9CR29 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc43Q9CR29 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc43Q9CR29 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc43Q9CR29 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc43Q9CR29 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.74■□□□□ 0.91
Ccdc43Q9CR29 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc43Q9CR29 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc43Q9CR29 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc43Q9CR29 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc43Q9CR29 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc43Q9CR29 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc43Q9CR29 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc43Q9CR29 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.73■□□□□ 0.91
Ccdc43Q9CR29 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Ccdc43Q9CR29 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc43Q9CR29 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.73■□□□□ 0.91
Ccdc43Q9CR29 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc43Q9CR29 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc43Q9CR29 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ccdc43Q9CR29 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc43Q9CR29 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc43Q9CR29 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc43Q9CR29 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc43Q9CR29 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.72■□□□□ 0.91
Ccdc43Q9CR29 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc43Q9CR29 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc43Q9CR29 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc43Q9CR29 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc43Q9CR29 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc43Q9CR29 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc43Q9CR29 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc43Q9CR29 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc43Q9CR29 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms