Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb1Q9CQ70 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb1Q9CQ70 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb1Q9CQ70 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
H2afb1Q9CQ70 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1Q9CQ70 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1Q9CQ70 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
H2afb1Q9CQ70 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1Q9CQ70 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1Q9CQ70 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1Q9CQ70 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1Q9CQ70 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
H2afb1Q9CQ70 Gm45417-201ENSMUST00000209533 758 ntBASIC15.32■□□□□ 0.04
H2afb1Q9CQ70 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
H2afb1Q9CQ70 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1Q9CQ70 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
H2afb1Q9CQ70 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1Q9CQ70 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
H2afb1Q9CQ70 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.32■□□□□ 0.04
H2afb1Q9CQ70 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1Q9CQ70 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb1Q9CQ70 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1Q9CQ70 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1Q9CQ70 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1Q9CQ70 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
H2afb1Q9CQ70 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
H2afb1Q9CQ70 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1Q9CQ70 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1Q9CQ70 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1Q9CQ70 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.3■□□□□ 0.04
H2afb1Q9CQ70 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1Q9CQ70 Gm40848-201ENSMUST00000221998 324 ntBASIC15.3■□□□□ 0.04
H2afb1Q9CQ70 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1Q9CQ70 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1Q9CQ70 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1Q9CQ70 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1Q9CQ70 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
H2afb1Q9CQ70 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.3■□□□□ 0.04
H2afb1Q9CQ70 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1Q9CQ70 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
H2afb1Q9CQ70 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
H2afb1Q9CQ70 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1Q9CQ70 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1Q9CQ70 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1Q9CQ70 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1Q9CQ70 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1Q9CQ70 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.29■□□□□ 0.04
H2afb1Q9CQ70 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
H2afb1Q9CQ70 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1Q9CQ70 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1Q9CQ70 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
H2afb1Q9CQ70 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1Q9CQ70 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1Q9CQ70 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
H2afb1Q9CQ70 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1Q9CQ70 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1Q9CQ70 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1Q9CQ70 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1Q9CQ70 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1Q9CQ70 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
H2afb1Q9CQ70 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.28■□□□□ 0.04
H2afb1Q9CQ70 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.28■□□□□ 0.04
H2afb1Q9CQ70 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.28■□□□□ 0.04
H2afb1Q9CQ70 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1Q9CQ70 Gm43017-201ENSMUST00000198296 752 ntBASIC15.28■□□□□ 0.04
H2afb1Q9CQ70 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.28■□□□□ 0.04
H2afb1Q9CQ70 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1Q9CQ70 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1Q9CQ70 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1Q9CQ70 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1Q9CQ70 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1Q9CQ70 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1Q9CQ70 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1Q9CQ70 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb1Q9CQ70 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb1Q9CQ70 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms