Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl54Q9CPW3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl54Q9CPW3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Mrpl54Q9CPW3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl54Q9CPW3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mrpl54Q9CPW3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl54Q9CPW3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Mrpl54Q9CPW3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl54Q9CPW3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl54Q9CPW3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl54Q9CPW3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl54Q9CPW3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Mrpl54Q9CPW3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl54Q9CPW3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.66■□□□□ 0.26
Mrpl54Q9CPW3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mrpl54Q9CPW3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl54Q9CPW3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl54Q9CPW3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl54Q9CPW3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Mrpl54Q9CPW3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.65■□□□□ 0.26
Mrpl54Q9CPW3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl54Q9CPW3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.65■□□□□ 0.26
Mrpl54Q9CPW3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl54Q9CPW3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl54Q9CPW3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl54Q9CPW3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl54Q9CPW3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mrpl54Q9CPW3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.65■□□□□ 0.26
Mrpl54Q9CPW3 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.65■□□□□ 0.26
Mrpl54Q9CPW3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Mrpl54Q9CPW3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl54Q9CPW3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl54Q9CPW3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.64■□□□□ 0.25
Mrpl54Q9CPW3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl54Q9CPW3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl54Q9CPW3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl54Q9CPW3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl54Q9CPW3 Gm10420-201ENSMUST00000121713 882 ntBASIC16.64■□□□□ 0.25
Mrpl54Q9CPW3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Mrpl54Q9CPW3 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.64■□□□□ 0.25
Mrpl54Q9CPW3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl54Q9CPW3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl54Q9CPW3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl54Q9CPW3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl54Q9CPW3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl54Q9CPW3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mrpl54Q9CPW3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mrpl54Q9CPW3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mrpl54Q9CPW3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Mrpl54Q9CPW3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mrpl54Q9CPW3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mrpl54Q9CPW3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mrpl54Q9CPW3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.63■□□□□ 0.25
Mrpl54Q9CPW3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mrpl54Q9CPW3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.63■□□□□ 0.25
Mrpl54Q9CPW3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Mrpl54Q9CPW3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mrpl54Q9CPW3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mrpl54Q9CPW3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mrpl54Q9CPW3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.63■□□□□ 0.25
Mrpl54Q9CPW3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mrpl54Q9CPW3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Mrpl54Q9CPW3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mrpl54Q9CPW3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.63■□□□□ 0.25
Mrpl54Q9CPW3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mrpl54Q9CPW3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mrpl54Q9CPW3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mrpl54Q9CPW3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mrpl54Q9CPW3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Mrpl54Q9CPW3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mrpl54Q9CPW3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mrpl54Q9CPW3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mrpl54Q9CPW3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mrpl54Q9CPW3 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.62■□□□□ 0.25
Mrpl54Q9CPW3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mrpl54Q9CPW3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Mrpl54Q9CPW3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Mrpl54Q9CPW3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mrpl54Q9CPW3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mrpl54Q9CPW3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mrpl54Q9CPW3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mrpl54Q9CPW3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mrpl54Q9CPW3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Mrpl54Q9CPW3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Mrpl54Q9CPW3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mrpl54Q9CPW3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.61■□□□□ 0.25
Mrpl54Q9CPW3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mrpl54Q9CPW3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Mrpl54Q9CPW3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.61■□□□□ 0.25
Mrpl54Q9CPW3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mrpl54Q9CPW3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Mrpl54Q9CPW3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mrpl54Q9CPW3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mrpl54Q9CPW3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mrpl54Q9CPW3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mrpl54Q9CPW3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mrpl54Q9CPW3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mrpl54Q9CPW3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mrpl54Q9CPW3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Mrpl54Q9CPW3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 1082 ms