Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.77■□□□□ 0.92
Gtf2a1Q99PM3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf2a1Q99PM3 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.77■□□□□ 0.92
Gtf2a1Q99PM3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf2a1Q99PM3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Gtf2a1Q99PM3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gtf2a1Q99PM3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Gtf2a1Q99PM3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gtf2a1Q99PM3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2a1Q99PM3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Gtf2a1Q99PM3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2a1Q99PM3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2a1Q99PM3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2a1Q99PM3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2a1Q99PM3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC20.76■□□□□ 0.91
Gtf2a1Q99PM3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2a1Q99PM3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2a1Q99PM3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2a1Q99PM3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2a1Q99PM3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2a1Q99PM3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Gtf2a1Q99PM3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2a1Q99PM3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2a1Q99PM3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Gtf2a1Q99PM3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gtf2a1Q99PM3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gtf2a1Q99PM3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.75■□□□□ 0.91
Gtf2a1Q99PM3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Gtf2a1Q99PM3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gtf2a1Q99PM3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gtf2a1Q99PM3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gtf2a1Q99PM3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Gtf2a1Q99PM3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gtf2a1Q99PM3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.75■□□□□ 0.91
Gtf2a1Q99PM3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf2a1Q99PM3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf2a1Q99PM3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf2a1Q99PM3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf2a1Q99PM3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf2a1Q99PM3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf2a1Q99PM3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf2a1Q99PM3 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.74■□□□□ 0.91
Gtf2a1Q99PM3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf2a1Q99PM3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC20.74■□□□□ 0.91
Gtf2a1Q99PM3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf2a1Q99PM3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf2a1Q99PM3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf2a1Q99PM3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf2a1Q99PM3 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.73■□□□□ 0.91
Gtf2a1Q99PM3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf2a1Q99PM3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf2a1Q99PM3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf2a1Q99PM3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf2a1Q99PM3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.72■□□□□ 0.91
Gtf2a1Q99PM3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf2a1Q99PM3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Gtf2a1Q99PM3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.72■□□□□ 0.91
Gtf2a1Q99PM3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf2a1Q99PM3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf2a1Q99PM3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf2a1Q99PM3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf2a1Q99PM3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf2a1Q99PM3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2a1Q99PM3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2a1Q99PM3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2a1Q99PM3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2a1Q99PM3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2a1Q99PM3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Gtf2a1Q99PM3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2a1Q99PM3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2a1Q99PM3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2a1Q99PM3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2a1Q99PM3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2a1Q99PM3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Gtf2a1Q99PM3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Gtf2a1Q99PM3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gtf2a1Q99PM3 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.7■□□□□ 0.9
Gtf2a1Q99PM3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Gtf2a1Q99PM3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gtf2a1Q99PM3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gtf2a1Q99PM3 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.7■□□□□ 0.9
Gtf2a1Q99PM3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.7■□□□□ 0.9
Gtf2a1Q99PM3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Gtf2a1Q99PM3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Gtf2a1Q99PM3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf2a1Q99PM3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf2a1Q99PM3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf2a1Q99PM3 Gm45855-201ENSMUST00000212546 880 ntBASIC20.69■□□□□ 0.9
Gtf2a1Q99PM3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf2a1Q99PM3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf2a1Q99PM3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf2a1Q99PM3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf2a1Q99PM3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf2a1Q99PM3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.69■□□□□ 0.9
Gtf2a1Q99PM3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf2a1Q99PM3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf2a1Q99PM3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf2a1Q99PM3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf2a1Q99PM3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf2a1Q99PM3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms