Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh15Q99PJ1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh15Q99PJ1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Pcdh15Q99PJ1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh15Q99PJ1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh15Q99PJ1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh15Q99PJ1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.62■■□□□ 1.05
Pcdh15Q99PJ1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh15Q99PJ1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh15Q99PJ1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh15Q99PJ1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdh15Q99PJ1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdh15Q99PJ1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdh15Q99PJ1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
Pcdh15Q99PJ1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.61■■□□□ 1.05
Pcdh15Q99PJ1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh15Q99PJ1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Pcdh15Q99PJ1 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.6■■□□□ 1.05
Pcdh15Q99PJ1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh15Q99PJ1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh15Q99PJ1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdh15Q99PJ1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh15Q99PJ1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh15Q99PJ1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh15Q99PJ1 Timm23-208ENSMUST00000226683 750 ntBASIC21.59■■□□□ 1.05
Pcdh15Q99PJ1 Odf3b-204ENSMUST00000227834 930 ntBASIC21.59■■□□□ 1.05
Pcdh15Q99PJ1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Pcdh15Q99PJ1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Pcdh15Q99PJ1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh15Q99PJ1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC21.59■■□□□ 1.05
Pcdh15Q99PJ1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdh15Q99PJ1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdh15Q99PJ1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdh15Q99PJ1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.05
Pcdh15Q99PJ1 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.58■■□□□ 1.05
Pcdh15Q99PJ1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdh15Q99PJ1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh15Q99PJ1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh15Q99PJ1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh15Q99PJ1 Gm37292-201ENSMUST00000192062 758 ntBASIC21.57■■□□□ 1.04
Pcdh15Q99PJ1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.57■■□□□ 1.04
Pcdh15Q99PJ1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh15Q99PJ1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Pcdh15Q99PJ1 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.57■■□□□ 1.04
Pcdh15Q99PJ1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh15Q99PJ1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.57■■□□□ 1.04
Pcdh15Q99PJ1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh15Q99PJ1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC21.57■■□□□ 1.04
Pcdh15Q99PJ1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh15Q99PJ1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh15Q99PJ1 Gm6345-202ENSMUST00000180900 204 ntBASIC21.56■■□□□ 1.04
Pcdh15Q99PJ1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.56■■□□□ 1.04
Pcdh15Q99PJ1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh15Q99PJ1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh15Q99PJ1 Gm42545-201ENSMUST00000202755 922 ntBASIC21.55■■□□□ 1.04
Pcdh15Q99PJ1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh15Q99PJ1 Gm18032-201ENSMUST00000222541 538 ntBASIC21.55■■□□□ 1.04
Pcdh15Q99PJ1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh15Q99PJ1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.55■■□□□ 1.04
Pcdh15Q99PJ1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh15Q99PJ1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh15Q99PJ1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcdh15Q99PJ1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh15Q99PJ1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.55■■□□□ 1.04
Pcdh15Q99PJ1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh15Q99PJ1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh15Q99PJ1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh15Q99PJ1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh15Q99PJ1 Gm23634-201ENSMUST00000175071 91 ntBASIC21.55■■□□□ 1.04
Pcdh15Q99PJ1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Pcdh15Q99PJ1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh15Q99PJ1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh15Q99PJ1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh15Q99PJ1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh15Q99PJ1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh15Q99PJ1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh15Q99PJ1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh15Q99PJ1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh15Q99PJ1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh15Q99PJ1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh15Q99PJ1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh15Q99PJ1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh15Q99PJ1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh15Q99PJ1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh15Q99PJ1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh15Q99PJ1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh15Q99PJ1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh15Q99PJ1 Gm7712-202ENSMUST00000222331 1510 ntBASIC21.53■■□□□ 1.04
Pcdh15Q99PJ1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh15Q99PJ1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh15Q99PJ1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh15Q99PJ1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.53■■□□□ 1.04
Pcdh15Q99PJ1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.53■■□□□ 1.04
Pcdh15Q99PJ1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh15Q99PJ1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh15Q99PJ1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh15Q99PJ1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh15Q99PJ1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Pcdh15Q99PJ1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh15Q99PJ1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms