Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.6■□□□□ 0.41
Nkx6-1Q99MA9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx6-1Q99MA9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nkx6-1Q99MA9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx6-1Q99MA9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nkx6-1Q99MA9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx6-1Q99MA9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx6-1Q99MA9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx6-1Q99MA9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx6-1Q99MA9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx6-1Q99MA9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx6-1Q99MA9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx6-1Q99MA9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx6-1Q99MA9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx6-1Q99MA9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx6-1Q99MA9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx6-1Q99MA9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Nkx6-1Q99MA9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx6-1Q99MA9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx6-1Q99MA9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx6-1Q99MA9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.58■□□□□ 0.4
Nkx6-1Q99MA9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx6-1Q99MA9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx6-1Q99MA9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx6-1Q99MA9 Gm5417-201ENSMUST00000079706 384 ntBASIC17.58■□□□□ 0.4
Nkx6-1Q99MA9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx6-1Q99MA9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Gm6433-201ENSMUST00000118634 875 ntBASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Mir5122-201ENSMUST00000175004 89 ntBASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Gm10231-201ENSMUST00000181584 441 ntBASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Gm10175-202ENSMUST00000208752 441 ntBASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx6-1Q99MA9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx6-1Q99MA9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Nkx6-1Q99MA9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx6-1Q99MA9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx6-1Q99MA9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx6-1Q99MA9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx6-1Q99MA9 Gm43799-201ENSMUST00000201845 579 ntBASIC17.56■□□□□ 0.4
Nkx6-1Q99MA9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.56■□□□□ 0.4
Nkx6-1Q99MA9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Nkx6-1Q99MA9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx6-1Q99MA9 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.55■□□□□ 0.4
Nkx6-1Q99MA9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx6-1Q99MA9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nkx6-1Q99MA9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx6-1Q99MA9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.55■□□□□ 0.4
Nkx6-1Q99MA9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.55■□□□□ 0.4
Nkx6-1Q99MA9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nkx6-1Q99MA9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx6-1Q99MA9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx6-1Q99MA9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx6-1Q99MA9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx6-1Q99MA9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx6-1Q99MA9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-1Q99MA9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-1Q99MA9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-1Q99MA9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Nkx6-1Q99MA9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Nkx6-1Q99MA9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.54■□□□□ 0.4
Nkx6-1Q99MA9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-1Q99MA9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nkx6-1Q99MA9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-1Q99MA9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.54■□□□□ 0.4
Nkx6-1Q99MA9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-1Q99MA9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-1Q99MA9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-1Q99MA9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nkx6-1Q99MA9 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.53■□□□□ 0.4
Nkx6-1Q99MA9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx6-1Q99MA9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Nkx6-1Q99MA9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx6-1Q99MA9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.53■□□□□ 0.4
Nkx6-1Q99MA9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Nkx6-1Q99MA9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.53■□□□□ 0.4
Nkx6-1Q99MA9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx6-1Q99MA9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-1Q99MA9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-1Q99MA9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-1Q99MA9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-1Q99MA9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-1Q99MA9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-1Q99MA9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms