Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.65■□□□□ 0.42
Chmp1b1Q99LU0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp1b1Q99LU0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp1b1Q99LU0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.65■□□□□ 0.42
Chmp1b1Q99LU0 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.65■□□□□ 0.42
Chmp1b1Q99LU0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp1b1Q99LU0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Chmp1b1Q99LU0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.65■□□□□ 0.42
Chmp1b1Q99LU0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp1b1Q99LU0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp1b1Q99LU0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp1b1Q99LU0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp1b1Q99LU0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp1b1Q99LU0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp1b1Q99LU0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp1b1Q99LU0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp1b1Q99LU0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp1b1Q99LU0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp1b1Q99LU0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp1b1Q99LU0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Chmp1b1Q99LU0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp1b1Q99LU0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.64■□□□□ 0.41
Chmp1b1Q99LU0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Chmp1b1Q99LU0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Chmp1b1Q99LU0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp1b1Q99LU0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp1b1Q99LU0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Chmp1b1Q99LU0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp1b1Q99LU0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Chmp1b1Q99LU0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp1b1Q99LU0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp1b1Q99LU0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.63■□□□□ 0.41
Chmp1b1Q99LU0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp1b1Q99LU0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp1b1Q99LU0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp1b1Q99LU0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp1b1Q99LU0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Chmp1b1Q99LU0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp1b1Q99LU0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp1b1Q99LU0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp1b1Q99LU0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp1b1Q99LU0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.62■□□□□ 0.41
Chmp1b1Q99LU0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp1b1Q99LU0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp1b1Q99LU0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp1b1Q99LU0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Chmp1b1Q99LU0 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.62■□□□□ 0.41
Chmp1b1Q99LU0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp1b1Q99LU0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp1b1Q99LU0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Chmp1b1Q99LU0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp1b1Q99LU0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp1b1Q99LU0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp1b1Q99LU0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp1b1Q99LU0 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.61■□□□□ 0.41
Chmp1b1Q99LU0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp1b1Q99LU0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp1b1Q99LU0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Chmp1b1Q99LU0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.61■□□□□ 0.41
Chmp1b1Q99LU0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp1b1Q99LU0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Chmp1b1Q99LU0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Chmp1b1Q99LU0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Chmp1b1Q99LU0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Chmp1b1Q99LU0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Chmp1b1Q99LU0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp1b1Q99LU0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp1b1Q99LU0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp1b1Q99LU0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Chmp1b1Q99LU0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp1b1Q99LU0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp1b1Q99LU0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp1b1Q99LU0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp1b1Q99LU0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp1b1Q99LU0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp1b1Q99LU0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp1b1Q99LU0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chmp1b1Q99LU0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp1b1Q99LU0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp1b1Q99LU0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms