Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cttnbp2nlQ99LJ0 Serp2-204ENSMUST00000228055 705 ntBASIC18.92■□□□□ 0.62
Cttnbp2nlQ99LJ0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cttnbp2nlQ99LJ0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cttnbp2nlQ99LJ0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cttnbp2nlQ99LJ0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cttnbp2nlQ99LJ0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cttnbp2nlQ99LJ0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cttnbp2nlQ99LJ0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cttnbp2nlQ99LJ0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.9■□□□□ 0.62
Cttnbp2nlQ99LJ0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cttnbp2nlQ99LJ0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
Cttnbp2nlQ99LJ0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cttnbp2nlQ99LJ0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
Cttnbp2nlQ99LJ0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
Cttnbp2nlQ99LJ0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cttnbp2nlQ99LJ0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cttnbp2nlQ99LJ0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cttnbp2nlQ99LJ0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cttnbp2nlQ99LJ0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cttnbp2nlQ99LJ0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Cttnbp2nlQ99LJ0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Cttnbp2nlQ99LJ0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cttnbp2nlQ99LJ0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cttnbp2nlQ99LJ0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cttnbp2nlQ99LJ0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.89■□□□□ 0.61
Cttnbp2nlQ99LJ0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.89■□□□□ 0.61
Cttnbp2nlQ99LJ0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.89■□□□□ 0.61
Cttnbp2nlQ99LJ0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cttnbp2nlQ99LJ0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.89■□□□□ 0.61
Cttnbp2nlQ99LJ0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cttnbp2nlQ99LJ0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cttnbp2nlQ99LJ0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cttnbp2nlQ99LJ0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cttnbp2nlQ99LJ0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cttnbp2nlQ99LJ0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cttnbp2nlQ99LJ0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cttnbp2nlQ99LJ0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.89■□□□□ 0.61
Cttnbp2nlQ99LJ0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cttnbp2nlQ99LJ0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cttnbp2nlQ99LJ0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cttnbp2nlQ99LJ0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cttnbp2nlQ99LJ0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cttnbp2nlQ99LJ0 Gm14117-201ENSMUST00000122417 843 ntBASIC18.87■□□□□ 0.61
Cttnbp2nlQ99LJ0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.87■□□□□ 0.61
Cttnbp2nlQ99LJ0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cttnbp2nlQ99LJ0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Cttnbp2nlQ99LJ0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cttnbp2nlQ99LJ0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cttnbp2nlQ99LJ0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cttnbp2nlQ99LJ0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cttnbp2nlQ99LJ0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.86■□□□□ 0.61
Cttnbp2nlQ99LJ0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cttnbp2nlQ99LJ0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cttnbp2nlQ99LJ0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cttnbp2nlQ99LJ0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cttnbp2nlQ99LJ0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cttnbp2nlQ99LJ0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.86■□□□□ 0.61
Cttnbp2nlQ99LJ0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.86■□□□□ 0.61
Cttnbp2nlQ99LJ0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cttnbp2nlQ99LJ0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cttnbp2nlQ99LJ0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cttnbp2nlQ99LJ0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms