Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcd2Q99JR8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcd2Q99JR8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
Smarcd2Q99JR8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcd2Q99JR8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcd2Q99JR8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcd2Q99JR8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcd2Q99JR8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Smarcd2Q99JR8 Gm13158-201ENSMUST00000122007 736 ntBASIC19.01■□□□□ 0.63
Smarcd2Q99JR8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.01■□□□□ 0.63
Smarcd2Q99JR8 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.01■□□□□ 0.63
Smarcd2Q99JR8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcd2Q99JR8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Smarcd2Q99JR8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcd2Q99JR8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcd2Q99JR8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd2Q99JR8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd2Q99JR8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd2Q99JR8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd2Q99JR8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcd2Q99JR8 AL672049.1-201ENSMUST00000197943 91 ntBASIC19■□□□□ 0.63
Smarcd2Q99JR8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Smarcd2Q99JR8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19■□□□□ 0.63
Smarcd2Q99JR8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd2Q99JR8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd2Q99JR8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd2Q99JR8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcd2Q99JR8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcd2Q99JR8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd2Q99JR8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd2Q99JR8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcd2Q99JR8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd2Q99JR8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Smarcd2Q99JR8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd2Q99JR8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Smarcd2Q99JR8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd2Q99JR8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd2Q99JR8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd2Q99JR8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd2Q99JR8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd2Q99JR8 Gm7977-201ENSMUST00000193787 748 ntBASIC18.99■□□□□ 0.63
Smarcd2Q99JR8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.99■□□□□ 0.63
Smarcd2Q99JR8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Smarcd2Q99JR8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd2Q99JR8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd2Q99JR8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd2Q99JR8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd2Q99JR8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd2Q99JR8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd2Q99JR8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd2Q99JR8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd2Q99JR8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Smarcd2Q99JR8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd2Q99JR8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.98■□□□□ 0.63
Smarcd2Q99JR8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.98■□□□□ 0.63
Smarcd2Q99JR8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd2Q99JR8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.98■□□□□ 0.63
Smarcd2Q99JR8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd2Q99JR8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Smarcd2Q99JR8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd2Q99JR8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Smarcd2Q99JR8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd2Q99JR8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd2Q99JR8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd2Q99JR8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Smarcd2Q99JR8 Gm13836-201ENSMUST00000121159 501 ntBASIC18.97■□□□□ 0.63
Smarcd2Q99JR8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd2Q99JR8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd2Q99JR8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd2Q99JR8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd2Q99JR8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd2Q99JR8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.97■□□□□ 0.63
Smarcd2Q99JR8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd2Q99JR8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd2Q99JR8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd2Q99JR8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd2Q99JR8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd2Q99JR8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd2Q99JR8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Smarcd2Q99JR8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd2Q99JR8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd2Q99JR8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd2Q99JR8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd2Q99JR8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd2Q99JR8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd2Q99JR8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd2Q99JR8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd2Q99JR8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Smarcd2Q99JR8 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.96■□□□□ 0.63
Smarcd2Q99JR8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.96■□□□□ 0.63
Smarcd2Q99JR8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd2Q99JR8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd2Q99JR8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd2Q99JR8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Smarcd2Q99JR8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd2Q99JR8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd2Q99JR8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd2Q99JR8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Smarcd2Q99JR8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd2Q99JR8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms