Protein–RNA interactions for Protein: Q925H1

Trps1, Zinc finger transcription factor Trps1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trps1Q925H1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trps1Q925H1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trps1Q925H1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trps1Q925H1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.49■□□□□ 0.71
Trps1Q925H1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trps1Q925H1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trps1Q925H1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Trps1Q925H1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trps1Q925H1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trps1Q925H1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trps1Q925H1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trps1Q925H1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trps1Q925H1 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.49■□□□□ 0.71
Trps1Q925H1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trps1Q925H1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trps1Q925H1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trps1Q925H1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trps1Q925H1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trps1Q925H1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trps1Q925H1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trps1Q925H1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Trps1Q925H1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.48■□□□□ 0.71
Trps1Q925H1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trps1Q925H1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trps1Q925H1 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.48■□□□□ 0.71
Trps1Q925H1 Gm10033-202ENSMUST00000211874 928 ntBASIC19.48■□□□□ 0.71
Trps1Q925H1 Gm5874-201ENSMUST00000096101 508 ntBASIC19.48■□□□□ 0.71
Trps1Q925H1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trps1Q925H1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trps1Q925H1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trps1Q925H1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trps1Q925H1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trps1Q925H1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trps1Q925H1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trps1Q925H1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trps1Q925H1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.47■□□□□ 0.71
Trps1Q925H1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trps1Q925H1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trps1Q925H1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trps1Q925H1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trps1Q925H1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trps1Q925H1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trps1Q925H1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trps1Q925H1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trps1Q925H1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trps1Q925H1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trps1Q925H1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trps1Q925H1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trps1Q925H1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trps1Q925H1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trps1Q925H1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.45■□□□□ 0.7
Trps1Q925H1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.45■□□□□ 0.7
Trps1Q925H1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.45■□□□□ 0.7
Trps1Q925H1 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.45■□□□□ 0.7
Trps1Q925H1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trps1Q925H1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trps1Q925H1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trps1Q925H1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trps1Q925H1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trps1Q925H1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trps1Q925H1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trps1Q925H1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
Trps1Q925H1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.44■□□□□ 0.7
Trps1Q925H1 Gm18284-201ENSMUST00000172604 624 ntBASIC19.44■□□□□ 0.7
Trps1Q925H1 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.44■□□□□ 0.7
Trps1Q925H1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trps1Q925H1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trps1Q925H1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trps1Q925H1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trps1Q925H1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trps1Q925H1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trps1Q925H1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.43■□□□□ 0.7
Trps1Q925H1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trps1Q925H1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trps1Q925H1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trps1Q925H1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trps1Q925H1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
Trps1Q925H1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.43■□□□□ 0.7
Trps1Q925H1 Gm42642-201ENSMUST00000200683 355 ntBASIC19.43■□□□□ 0.7
Trps1Q925H1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trps1Q925H1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trps1Q925H1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trps1Q925H1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trps1Q925H1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trps1Q925H1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trps1Q925H1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trps1Q925H1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trps1Q925H1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Trps1Q925H1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trps1Q925H1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trps1Q925H1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trps1Q925H1 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.42■□□□□ 0.7
Trps1Q925H1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trps1Q925H1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trps1Q925H1 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.41■□□□□ 0.7
Trps1Q925H1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trps1Q925H1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.41■□□□□ 0.7
Trps1Q925H1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trps1Q925H1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trps1Q925H1 Gm18671-201ENSMUST00000214826 683 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms