Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp1aQ921W0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chmp1aQ921W0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.54■□□□□ 0.24
Chmp1aQ921W0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp1aQ921W0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp1aQ921W0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.54■□□□□ 0.24
Chmp1aQ921W0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp1aQ921W0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp1aQ921W0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.53■□□□□ 0.24
Chmp1aQ921W0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp1aQ921W0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp1aQ921W0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp1aQ921W0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp1aQ921W0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
Chmp1aQ921W0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.53■□□□□ 0.24
Chmp1aQ921W0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp1aQ921W0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Chmp1aQ921W0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.53■□□□□ 0.24
Chmp1aQ921W0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp1aQ921W0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp1aQ921W0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Chmp1aQ921W0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Chmp1aQ921W0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp1aQ921W0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp1aQ921W0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Chmp1aQ921W0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp1aQ921W0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp1aQ921W0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp1aQ921W0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Chmp1aQ921W0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp1aQ921W0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Chmp1aQ921W0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.52■□□□□ 0.24
Chmp1aQ921W0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.52■□□□□ 0.24
Chmp1aQ921W0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp1aQ921W0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp1aQ921W0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Chmp1aQ921W0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp1aQ921W0 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.52■□□□□ 0.23
Chmp1aQ921W0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Chmp1aQ921W0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp1aQ921W0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp1aQ921W0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Chmp1aQ921W0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp1aQ921W0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp1aQ921W0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp1aQ921W0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp1aQ921W0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp1aQ921W0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp1aQ921W0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp1aQ921W0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp1aQ921W0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chmp1aQ921W0 Gm15820-201ENSMUST00000201566 728 ntBASIC16.51■□□□□ 0.23
Chmp1aQ921W0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.51■□□□□ 0.23
Chmp1aQ921W0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp1aQ921W0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp1aQ921W0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chmp1aQ921W0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp1aQ921W0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.51■□□□□ 0.23
Chmp1aQ921W0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp1aQ921W0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp1aQ921W0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp1aQ921W0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp1aQ921W0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp1aQ921W0 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.5■□□□□ 0.23
Chmp1aQ921W0 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.5■□□□□ 0.23
Chmp1aQ921W0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp1aQ921W0 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.5■□□□□ 0.23
Chmp1aQ921W0 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.5■□□□□ 0.23
Chmp1aQ921W0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp1aQ921W0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp1aQ921W0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chmp1aQ921W0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp1aQ921W0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp1aQ921W0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp1aQ921W0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp1aQ921W0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp1aQ921W0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp1aQ921W0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp1aQ921W0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Chmp1aQ921W0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp1aQ921W0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp1aQ921W0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp1aQ921W0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp1aQ921W0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp1aQ921W0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp1aQ921W0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp1aQ921W0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp1aQ921W0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Chmp1aQ921W0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.49■□□□□ 0.23
Chmp1aQ921W0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chmp1aQ921W0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp1aQ921W0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp1aQ921W0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp1aQ921W0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.48■□□□□ 0.23
Chmp1aQ921W0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Chmp1aQ921W0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp1aQ921W0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp1aQ921W0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp1aQ921W0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp1aQ921W0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms