Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.7■□□□□ 0.74
Pcdha11Q91Y19 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pcdha11Q91Y19 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha11Q91Y19 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha11Q91Y19 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha11Q91Y19 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha11Q91Y19 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha11Q91Y19 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha11Q91Y19 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha11Q91Y19 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pcdha11Q91Y19 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha11Q91Y19 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.69■□□□□ 0.74
Pcdha11Q91Y19 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha11Q91Y19 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.69■□□□□ 0.74
Pcdha11Q91Y19 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha11Q91Y19 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.69■□□□□ 0.74
Pcdha11Q91Y19 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha11Q91Y19 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha11Q91Y19 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdha11Q91Y19 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha11Q91Y19 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha11Q91Y19 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha11Q91Y19 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha11Q91Y19 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdha11Q91Y19 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Pcdha11Q91Y19 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.68■□□□□ 0.74
Pcdha11Q91Y19 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdha11Q91Y19 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdha11Q91Y19 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Gm6211-202ENSMUST00000167849 925 ntBASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha11Q91Y19 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha11Q91Y19 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha11Q91Y19 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha11Q91Y19 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha11Q91Y19 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha11Q91Y19 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha11Q91Y19 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.66■□□□□ 0.74
Pcdha11Q91Y19 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdha11Q91Y19 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdha11Q91Y19 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdha11Q91Y19 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha11Q91Y19 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha11Q91Y19 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Pcdha11Q91Y19 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha11Q91Y19 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Pcdha11Q91Y19 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha11Q91Y19 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha11Q91Y19 Gm13148-201ENSMUST00000118892 745 ntBASIC19.65■□□□□ 0.74
Pcdha11Q91Y19 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha11Q91Y19 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdha11Q91Y19 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Pcdha11Q91Y19 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Pcdha11Q91Y19 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha11Q91Y19 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdha11Q91Y19 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdha11Q91Y19 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdha11Q91Y19 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha11Q91Y19 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.64■□□□□ 0.73
Pcdha11Q91Y19 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.64■□□□□ 0.73
Pcdha11Q91Y19 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.64■□□□□ 0.73
Pcdha11Q91Y19 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha11Q91Y19 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha11Q91Y19 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha11Q91Y19 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha11Q91Y19 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha11Q91Y19 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha11Q91Y19 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha11Q91Y19 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha11Q91Y19 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha11Q91Y19 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha11Q91Y19 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha11Q91Y19 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.63■□□□□ 0.73
Pcdha11Q91Y19 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha11Q91Y19 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha11Q91Y19 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha11Q91Y19 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha11Q91Y19 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha11Q91Y19 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdha11Q91Y19 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha11Q91Y19 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Pcdha11Q91Y19 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
Pcdha11Q91Y19 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms