Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.59■□□□□ 0.73
Pcdha3Q91Y16 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdha3Q91Y16 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.58■□□□□ 0.73
Pcdha3Q91Y16 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdha3Q91Y16 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdha3Q91Y16 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha3Q91Y16 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.58■□□□□ 0.72
Pcdha3Q91Y16 Gm38205-201ENSMUST00000192243 258 ntBASIC19.58■□□□□ 0.72
Pcdha3Q91Y16 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.58■□□□□ 0.72
Pcdha3Q91Y16 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha3Q91Y16 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha3Q91Y16 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.58■□□□□ 0.72
Pcdha3Q91Y16 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha3Q91Y16 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha3Q91Y16 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Pcdha3Q91Y16 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha3Q91Y16 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha3Q91Y16 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha3Q91Y16 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha3Q91Y16 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha3Q91Y16 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha3Q91Y16 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha3Q91Y16 Gm7291-201ENSMUST00000199147 382 ntBASIC19.57■□□□□ 0.72
Pcdha3Q91Y16 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha3Q91Y16 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha3Q91Y16 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Pcdha3Q91Y16 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha3Q91Y16 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha3Q91Y16 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Pcdha3Q91Y16 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha3Q91Y16 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha3Q91Y16 Gm13146-201ENSMUST00000118508 780 ntBASIC19.56■□□□□ 0.72
Pcdha3Q91Y16 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha3Q91Y16 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha3Q91Y16 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha3Q91Y16 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha3Q91Y16 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha3Q91Y16 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha3Q91Y16 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha3Q91Y16 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha3Q91Y16 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha3Q91Y16 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha3Q91Y16 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha3Q91Y16 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha3Q91Y16 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha3Q91Y16 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pcdha3Q91Y16 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha3Q91Y16 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Pcdha3Q91Y16 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pcdha3Q91Y16 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Pcdha3Q91Y16 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha3Q91Y16 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha3Q91Y16 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha3Q91Y16 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha3Q91Y16 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha3Q91Y16 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha3Q91Y16 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha3Q91Y16 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.54■□□□□ 0.72
Pcdha3Q91Y16 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.54■□□□□ 0.72
Pcdha3Q91Y16 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.54■□□□□ 0.72
Pcdha3Q91Y16 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.54■□□□□ 0.72
Pcdha3Q91Y16 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha3Q91Y16 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Pcdha3Q91Y16 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha3Q91Y16 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Pcdha3Q91Y16 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.54■□□□□ 0.72
Pcdha3Q91Y16 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha3Q91Y16 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha3Q91Y16 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha3Q91Y16 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha3Q91Y16 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Pcdha3Q91Y16 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha3Q91Y16 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha3Q91Y16 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha3Q91Y16 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha3Q91Y16 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha3Q91Y16 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha3Q91Y16 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha3Q91Y16 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Pcdha3Q91Y16 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha3Q91Y16 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.53■□□□□ 0.72
Pcdha3Q91Y16 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha3Q91Y16 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha3Q91Y16 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha3Q91Y16 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha3Q91Y16 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha3Q91Y16 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha3Q91Y16 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Pcdha3Q91Y16 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha3Q91Y16 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha3Q91Y16 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha3Q91Y16 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdha3Q91Y16 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha3Q91Y16 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha3Q91Y16 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha3Q91Y16 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha3Q91Y16 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha3Q91Y16 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdha3Q91Y16 Gm7514-201ENSMUST00000209475 934 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms