Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC22.17■■□□□ 1.14
Pcdhb5Q91XZ5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb5Q91XZ5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb5Q91XZ5 Gm11249-201ENSMUST00000117071 859 ntBASIC22.17■■□□□ 1.14
Pcdhb5Q91XZ5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC22.17■■□□□ 1.14
Pcdhb5Q91XZ5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb5Q91XZ5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC22.16■■□□□ 1.14
Pcdhb5Q91XZ5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC22.16■■□□□ 1.14
Pcdhb5Q91XZ5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb5Q91XZ5 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb5Q91XZ5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC22.16■■□□□ 1.14
Pcdhb5Q91XZ5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb5Q91XZ5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb5Q91XZ5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb5Q91XZ5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb5Q91XZ5 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb5Q91XZ5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb5Q91XZ5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Pcdhb5Q91XZ5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb5Q91XZ5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC22.15■■□□□ 1.14
Pcdhb5Q91XZ5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Pcdhb5Q91XZ5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Pcdhb5Q91XZ5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb5Q91XZ5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb5Q91XZ5 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Pcdhb5Q91XZ5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb5Q91XZ5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb5Q91XZ5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Pcdhb5Q91XZ5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC22.14■■□□□ 1.14
Pcdhb5Q91XZ5 Gm21596-201ENSMUST00000178049 1316 ntBASIC22.14■■□□□ 1.14
Pcdhb5Q91XZ5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdhb5Q91XZ5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC22.14■■□□□ 1.13
Pcdhb5Q91XZ5 Mir6982-201ENSMUST00000184354 68 ntBASIC22.14■■□□□ 1.13
Pcdhb5Q91XZ5 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhb5Q91XZ5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhb5Q91XZ5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhb5Q91XZ5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhb5Q91XZ5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.13■■□□□ 1.13
Pcdhb5Q91XZ5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
Pcdhb5Q91XZ5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb5Q91XZ5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb5Q91XZ5 Gm2399-201ENSMUST00000104944 225 ntBASIC22.13■■□□□ 1.13
Pcdhb5Q91XZ5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
Pcdhb5Q91XZ5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Pcdhb5Q91XZ5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Pcdhb5Q91XZ5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb5Q91XZ5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb5Q91XZ5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb5Q91XZ5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb5Q91XZ5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb5Q91XZ5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb5Q91XZ5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb5Q91XZ5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb5Q91XZ5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Pcdhb5Q91XZ5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb5Q91XZ5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb5Q91XZ5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb5Q91XZ5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb5Q91XZ5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb5Q91XZ5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb5Q91XZ5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Pcdhb5Q91XZ5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb5Q91XZ5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb5Q91XZ5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb5Q91XZ5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb5Q91XZ5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Pcdhb5Q91XZ5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb5Q91XZ5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Pcdhb5Q91XZ5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC22.11■■□□□ 1.13
Pcdhb5Q91XZ5 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb5Q91XZ5 Gm15847-201ENSMUST00000121417 1065 ntBASIC22.11■■□□□ 1.13
Pcdhb5Q91XZ5 Mir7071-201ENSMUST00000184847 69 ntBASIC22.11■■□□□ 1.13
Pcdhb5Q91XZ5 Gm18666-201ENSMUST00000190039 958 ntBASIC22.11■■□□□ 1.13
Pcdhb5Q91XZ5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC22.11■■□□□ 1.13
Pcdhb5Q91XZ5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Pcdhb5Q91XZ5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb5Q91XZ5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb5Q91XZ5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
Pcdhb5Q91XZ5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb5Q91XZ5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb5Q91XZ5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Pcdhb5Q91XZ5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb5Q91XZ5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb5Q91XZ5 Arhgef33-211ENSMUST00000225658 473 ntBASIC22.1■■□□□ 1.13
Pcdhb5Q91XZ5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb5Q91XZ5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb5Q91XZ5 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb5Q91XZ5 Gm34220-201ENSMUST00000223001 2709 ntBASIC22.1■■□□□ 1.13
Pcdhb5Q91XZ5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb5Q91XZ5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb5Q91XZ5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb5Q91XZ5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb5Q91XZ5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb5Q91XZ5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb5Q91XZ5 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb5Q91XZ5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC22.09■■□□□ 1.13
Pcdhb5Q91XZ5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb5Q91XZ5 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb5Q91XZ5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb5Q91XZ5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms