Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdhb6Q91XZ4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhb6Q91XZ4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb6Q91XZ4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb6Q91XZ4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.31■□□□□ 0.68
Pcdhb6Q91XZ4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb6Q91XZ4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb6Q91XZ4 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.31■□□□□ 0.68
Pcdhb6Q91XZ4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.31■□□□□ 0.68
Pcdhb6Q91XZ4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb6Q91XZ4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhb6Q91XZ4 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.31■□□□□ 0.68
Pcdhb6Q91XZ4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
Pcdhb6Q91XZ4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb6Q91XZ4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb6Q91XZ4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb6Q91XZ4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhb6Q91XZ4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb6Q91XZ4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhb6Q91XZ4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb6Q91XZ4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb6Q91XZ4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb6Q91XZ4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb6Q91XZ4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb6Q91XZ4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb6Q91XZ4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb6Q91XZ4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb6Q91XZ4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.29■□□□□ 0.68
Pcdhb6Q91XZ4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb6Q91XZ4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb6Q91XZ4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Pcdhb6Q91XZ4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb6Q91XZ4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb6Q91XZ4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb6Q91XZ4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb6Q91XZ4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb6Q91XZ4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb6Q91XZ4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb6Q91XZ4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb6Q91XZ4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb6Q91XZ4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb6Q91XZ4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb6Q91XZ4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb6Q91XZ4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb6Q91XZ4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb6Q91XZ4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb6Q91XZ4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhb6Q91XZ4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb6Q91XZ4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb6Q91XZ4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb6Q91XZ4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.27■□□□□ 0.68
Pcdhb6Q91XZ4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb6Q91XZ4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Pcdhb6Q91XZ4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcdhb6Q91XZ4 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.27■□□□□ 0.68
Pcdhb6Q91XZ4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb6Q91XZ4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.27■□□□□ 0.68
Pcdhb6Q91XZ4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb6Q91XZ4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Pcdhb6Q91XZ4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
Pcdhb6Q91XZ4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb6Q91XZ4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb6Q91XZ4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb6Q91XZ4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb6Q91XZ4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb6Q91XZ4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdhb6Q91XZ4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.26■□□□□ 0.67
Pcdhb6Q91XZ4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb6Q91XZ4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb6Q91XZ4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb6Q91XZ4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb6Q91XZ4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pcdhb6Q91XZ4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb6Q91XZ4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.25■□□□□ 0.67
Pcdhb6Q91XZ4 Gm10033-202ENSMUST00000211874 928 ntBASIC19.25■□□□□ 0.67
Pcdhb6Q91XZ4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb6Q91XZ4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb6Q91XZ4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb6Q91XZ4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb6Q91XZ4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb6Q91XZ4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms