Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga11Q91XY8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Pcdhga11Q91XY8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga11Q91XY8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga11Q91XY8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
Pcdhga11Q91XY8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Pcdhga11Q91XY8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga11Q91XY8 Golph3-205ENSMUST00000228671 2842 ntBASIC18.03■□□□□ 0.48
Pcdhga11Q91XY8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga11Q91XY8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhga11Q91XY8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdhga11Q91XY8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga11Q91XY8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Pcdhga11Q91XY8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga11Q91XY8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga11Q91XY8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga11Q91XY8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga11Q91XY8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga11Q91XY8 Gm7860-201ENSMUST00000121190 879 ntBASIC18.02■□□□□ 0.48
Pcdhga11Q91XY8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga11Q91XY8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga11Q91XY8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga11Q91XY8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga11Q91XY8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga11Q91XY8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga11Q91XY8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga11Q91XY8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.02■□□□□ 0.47
Pcdhga11Q91XY8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhga11Q91XY8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhga11Q91XY8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhga11Q91XY8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhga11Q91XY8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhga11Q91XY8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhga11Q91XY8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhga11Q91XY8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhga11Q91XY8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhga11Q91XY8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdhga11Q91XY8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga11Q91XY8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga11Q91XY8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga11Q91XY8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga11Q91XY8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcdhga11Q91XY8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga11Q91XY8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga11Q91XY8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga11Q91XY8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga11Q91XY8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga11Q91XY8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga11Q91XY8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga11Q91XY8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga11Q91XY8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga11Q91XY8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga11Q91XY8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhga11Q91XY8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga11Q91XY8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga11Q91XY8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdhga11Q91XY8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhga11Q91XY8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga11Q91XY8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18■□□□□ 0.47
Pcdhga11Q91XY8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Pcdhga11Q91XY8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga11Q91XY8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga11Q91XY8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga11Q91XY8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhga11Q91XY8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.99■□□□□ 0.47
Pcdhga11Q91XY8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcdhga11Q91XY8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga11Q91XY8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga11Q91XY8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhga11Q91XY8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pcdhga11Q91XY8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdhga11Q91XY8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga11Q91XY8 Gm18284-201ENSMUST00000172604 624 ntBASIC17.99■□□□□ 0.47
Pcdhga11Q91XY8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga11Q91XY8 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.99■□□□□ 0.47
Pcdhga11Q91XY8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga11Q91XY8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga11Q91XY8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhga11Q91XY8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga11Q91XY8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga11Q91XY8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga11Q91XY8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga11Q91XY8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga11Q91XY8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga11Q91XY8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga11Q91XY8 Gm8495-201ENSMUST00000188740 694 ntBASIC17.98■□□□□ 0.47
Pcdhga11Q91XY8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhga11Q91XY8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhga11Q91XY8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga11Q91XY8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcdhga11Q91XY8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga11Q91XY8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga11Q91XY8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga11Q91XY8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhga11Q91XY8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga11Q91XY8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga11Q91XY8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga11Q91XY8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga11Q91XY8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga11Q91XY8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms