Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb1Q91XX8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb1Q91XX8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pcdhgb1Q91XX8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pcdhgb1Q91XX8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb1Q91XX8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb1Q91XX8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb1Q91XX8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhgb1Q91XX8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb1Q91XX8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb1Q91XX8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhgb1Q91XX8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb1Q91XX8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 Gm10653-202ENSMUST00000139570 835 ntBASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhgb1Q91XX8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb1Q91XX8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb1Q91XX8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhgb1Q91XX8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdhgb1Q91XX8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb1Q91XX8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb1Q91XX8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb1Q91XX8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.43■□□□□ 0.7
Pcdhgb1Q91XX8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb1Q91XX8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb1Q91XX8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhgb1Q91XX8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb1Q91XX8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdhgb1Q91XX8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb1Q91XX8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb1Q91XX8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.42■□□□□ 0.7
Pcdhgb1Q91XX8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhgb1Q91XX8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Pcdhgb1Q91XX8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.42■□□□□ 0.7
Pcdhgb1Q91XX8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.42■□□□□ 0.7
Pcdhgb1Q91XX8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Pcdhgb1Q91XX8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb1Q91XX8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb1Q91XX8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb1Q91XX8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb1Q91XX8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb1Q91XX8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb1Q91XX8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb1Q91XX8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb1Q91XX8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb1Q91XX8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Pcdhgb1Q91XX8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb1Q91XX8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.41■□□□□ 0.7
Pcdhgb1Q91XX8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb1Q91XX8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb1Q91XX8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.41■□□□□ 0.7
Pcdhgb1Q91XX8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb1Q91XX8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhgb1Q91XX8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.41■□□□□ 0.7
Pcdhgb1Q91XX8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb1Q91XX8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhgb1Q91XX8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb1Q91XX8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb1Q91XX8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb1Q91XX8 Gm12527-201ENSMUST00000117967 564 ntBASIC19.4■□□□□ 0.7
Pcdhgb1Q91XX8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb1Q91XX8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb1Q91XX8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms