Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgb4Q91XX6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhgb4Q91XX6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhgb4Q91XX6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhgb4Q91XX6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhgb4Q91XX6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.83■□□□□ 0.77
Pcdhgb4Q91XX6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhgb4Q91XX6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhgb4Q91XX6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Pcdhgb4Q91XX6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhgb4Q91XX6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhgb4Q91XX6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhgb4Q91XX6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhgb4Q91XX6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Pcdhgb4Q91XX6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb4Q91XX6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb4Q91XX6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb4Q91XX6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Pcdhgb4Q91XX6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb4Q91XX6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb4Q91XX6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb4Q91XX6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb4Q91XX6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhgb4Q91XX6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
Pcdhgb4Q91XX6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
Pcdhgb4Q91XX6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb4Q91XX6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Pcdhgb4Q91XX6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Pcdhgb4Q91XX6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb4Q91XX6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb4Q91XX6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb4Q91XX6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb4Q91XX6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb4Q91XX6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhgb4Q91XX6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Pcdhgb4Q91XX6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.8■□□□□ 0.76
Pcdhgb4Q91XX6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.8■□□□□ 0.76
Pcdhgb4Q91XX6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhgb4Q91XX6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb4Q91XX6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.8■□□□□ 0.76
Pcdhgb4Q91XX6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb4Q91XX6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.8■□□□□ 0.76
Pcdhgb4Q91XX6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhgb4Q91XX6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb4Q91XX6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb4Q91XX6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb4Q91XX6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb4Q91XX6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb4Q91XX6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.79■□□□□ 0.76
Pcdhgb4Q91XX6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.79■□□□□ 0.76
Pcdhgb4Q91XX6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb4Q91XX6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.79■□□□□ 0.76
Pcdhgb4Q91XX6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb4Q91XX6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhgb4Q91XX6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhgb4Q91XX6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb4Q91XX6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb4Q91XX6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb4Q91XX6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb4Q91XX6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb4Q91XX6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Pcdhgb4Q91XX6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.78■□□□□ 0.76
Pcdhgb4Q91XX6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb4Q91XX6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhgb4Q91XX6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb4Q91XX6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb4Q91XX6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb4Q91XX6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb4Q91XX6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb4Q91XX6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhgb4Q91XX6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb4Q91XX6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhgb4Q91XX6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb4Q91XX6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb4Q91XX6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Pcdhgb4Q91XX6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb4Q91XX6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.77■□□□□ 0.76
Pcdhgb4Q91XX6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb4Q91XX6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb4Q91XX6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.77■□□□□ 0.76
Pcdhgb4Q91XX6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhgb4Q91XX6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhgb4Q91XX6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhgb4Q91XX6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb4Q91XX6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb4Q91XX6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdhgb4Q91XX6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb4Q91XX6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.76■□□□□ 0.75
Pcdhgb4Q91XX6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb4Q91XX6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb4Q91XX6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Pcdhgb4Q91XX6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pcdhgb4Q91XX6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb4Q91XX6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb4Q91XX6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pcdhgb4Q91XX6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb4Q91XX6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb4Q91XX6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhgb4Q91XX6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhgb4Q91XX6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms