Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lims2Q91XD2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.28■□□□□ 0.68
Lims2Q91XD2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lims2Q91XD2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lims2Q91XD2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lims2Q91XD2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lims2Q91XD2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Lims2Q91XD2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lims2Q91XD2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lims2Q91XD2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.27■□□□□ 0.68
Lims2Q91XD2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lims2Q91XD2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lims2Q91XD2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Lims2Q91XD2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Lims2Q91XD2 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.27■□□□□ 0.68
Lims2Q91XD2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lims2Q91XD2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.27■□□□□ 0.68
Lims2Q91XD2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lims2Q91XD2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lims2Q91XD2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lims2Q91XD2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lims2Q91XD2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lims2Q91XD2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.26■□□□□ 0.67
Lims2Q91XD2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lims2Q91XD2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lims2Q91XD2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lims2Q91XD2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lims2Q91XD2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.26■□□□□ 0.67
Lims2Q91XD2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lims2Q91XD2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lims2Q91XD2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.26■□□□□ 0.67
Lims2Q91XD2 Rab3c-203ENSMUST00000224180 967 ntBASIC19.26■□□□□ 0.67
Lims2Q91XD2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lims2Q91XD2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.26■□□□□ 0.67
Lims2Q91XD2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lims2Q91XD2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lims2Q91XD2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lims2Q91XD2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lims2Q91XD2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lims2Q91XD2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lims2Q91XD2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Lims2Q91XD2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lims2Q91XD2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lims2Q91XD2 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.25■□□□□ 0.67
Lims2Q91XD2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lims2Q91XD2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.25■□□□□ 0.67
Lims2Q91XD2 Gm12441-201ENSMUST00000121806 588 ntBASIC19.25■□□□□ 0.67
Lims2Q91XD2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lims2Q91XD2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lims2Q91XD2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lims2Q91XD2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lims2Q91XD2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lims2Q91XD2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lims2Q91XD2 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.24■□□□□ 0.67
Lims2Q91XD2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lims2Q91XD2 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.24■□□□□ 0.67
Lims2Q91XD2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lims2Q91XD2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lims2Q91XD2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lims2Q91XD2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lims2Q91XD2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lims2Q91XD2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Lims2Q91XD2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.24■□□□□ 0.67
Lims2Q91XD2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lims2Q91XD2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Lims2Q91XD2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lims2Q91XD2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lims2Q91XD2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lims2Q91XD2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lims2Q91XD2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lims2Q91XD2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.23■□□□□ 0.67
Lims2Q91XD2 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.23■□□□□ 0.67
Lims2Q91XD2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lims2Q91XD2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Lims2Q91XD2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lims2Q91XD2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.23■□□□□ 0.67
Lims2Q91XD2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lims2Q91XD2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Lims2Q91XD2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lims2Q91XD2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Lims2Q91XD2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lims2Q91XD2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lims2Q91XD2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Lims2Q91XD2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lims2Q91XD2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lims2Q91XD2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Lims2Q91XD2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lims2Q91XD2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.22■□□□□ 0.67
Lims2Q91XD2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lims2Q91XD2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lims2Q91XD2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.22■□□□□ 0.67
Lims2Q91XD2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lims2Q91XD2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lims2Q91XD2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lims2Q91XD2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Lims2Q91XD2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Lims2Q91XD2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lims2Q91XD2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.22■□□□□ 0.67
Lims2Q91XD2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lims2Q91XD2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms