Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.99■□□□□ 0.47
Pcdh18Q8VHR0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh18Q8VHR0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh18Q8VHR0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh18Q8VHR0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh18Q8VHR0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdh18Q8VHR0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdh18Q8VHR0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh18Q8VHR0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh18Q8VHR0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh18Q8VHR0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh18Q8VHR0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh18Q8VHR0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh18Q8VHR0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh18Q8VHR0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh18Q8VHR0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh18Q8VHR0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh18Q8VHR0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh18Q8VHR0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh18Q8VHR0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdh18Q8VHR0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh18Q8VHR0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh18Q8VHR0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh18Q8VHR0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh18Q8VHR0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh18Q8VHR0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdh18Q8VHR0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh18Q8VHR0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh18Q8VHR0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdh18Q8VHR0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh18Q8VHR0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh18Q8VHR0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdh18Q8VHR0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh18Q8VHR0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh18Q8VHR0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh18Q8VHR0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Pcdh18Q8VHR0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.96■□□□□ 0.47
Pcdh18Q8VHR0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdh18Q8VHR0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh18Q8VHR0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh18Q8VHR0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pcdh18Q8VHR0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdh18Q8VHR0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdh18Q8VHR0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh18Q8VHR0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdh18Q8VHR0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh18Q8VHR0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh18Q8VHR0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.95■□□□□ 0.46
Pcdh18Q8VHR0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh18Q8VHR0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdh18Q8VHR0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh18Q8VHR0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Pcdh18Q8VHR0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
Pcdh18Q8VHR0 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.95■□□□□ 0.46
Pcdh18Q8VHR0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
Pcdh18Q8VHR0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh18Q8VHR0 AA386476-201ENSMUST00000098781 1665 ntBASIC17.95■□□□□ 0.46
Pcdh18Q8VHR0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh18Q8VHR0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh18Q8VHR0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdh18Q8VHR0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh18Q8VHR0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pcdh18Q8VHR0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh18Q8VHR0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh18Q8VHR0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pcdh18Q8VHR0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh18Q8VHR0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.94■□□□□ 0.46
Pcdh18Q8VHR0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh18Q8VHR0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh18Q8VHR0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdh18Q8VHR0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh18Q8VHR0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdh18Q8VHR0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.94■□□□□ 0.46
Pcdh18Q8VHR0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdh18Q8VHR0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh18Q8VHR0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh18Q8VHR0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh18Q8VHR0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.93■□□□□ 0.46
Pcdh18Q8VHR0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh18Q8VHR0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdh18Q8VHR0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdh18Q8VHR0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.93■□□□□ 0.46
Pcdh18Q8VHR0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh18Q8VHR0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh18Q8VHR0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdh18Q8VHR0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh18Q8VHR0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh18Q8VHR0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Pcdh18Q8VHR0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh18Q8VHR0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh18Q8VHR0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh18Q8VHR0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh18Q8VHR0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh18Q8VHR0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh18Q8VHR0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdh18Q8VHR0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh18Q8VHR0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Pcdh18Q8VHR0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh18Q8VHR0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdh18Q8VHR0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms