Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc1Q8VCB1 Gm13148-201ENSMUST00000118892 745 ntBASIC17.65■□□□□ 0.42
Ndc1Q8VCB1 Gm12441-201ENSMUST00000121806 588 ntBASIC17.65■□□□□ 0.42
Ndc1Q8VCB1 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.65■□□□□ 0.42
Ndc1Q8VCB1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc1Q8VCB1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc1Q8VCB1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc1Q8VCB1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ndc1Q8VCB1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ndc1Q8VCB1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndc1Q8VCB1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ndc1Q8VCB1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndc1Q8VCB1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndc1Q8VCB1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.64■□□□□ 0.41
Ndc1Q8VCB1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndc1Q8VCB1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.64■□□□□ 0.41
Ndc1Q8VCB1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndc1Q8VCB1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ndc1Q8VCB1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ndc1Q8VCB1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.64■□□□□ 0.41
Ndc1Q8VCB1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ndc1Q8VCB1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndc1Q8VCB1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc1Q8VCB1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc1Q8VCB1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ndc1Q8VCB1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc1Q8VCB1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.62■□□□□ 0.41
Ndc1Q8VCB1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.62■□□□□ 0.41
Ndc1Q8VCB1 Gm4968-201ENSMUST00000071458 858 ntBASIC17.62■□□□□ 0.41
Ndc1Q8VCB1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.62■□□□□ 0.41
Ndc1Q8VCB1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc1Q8VCB1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndc1Q8VCB1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ndc1Q8VCB1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
Ndc1Q8VCB1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndc1Q8VCB1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndc1Q8VCB1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndc1Q8VCB1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ndc1Q8VCB1 Gm5408-201ENSMUST00000197998 747 ntBASIC17.61■□□□□ 0.41
Ndc1Q8VCB1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndc1Q8VCB1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndc1Q8VCB1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ndc1Q8VCB1 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.61■□□□□ 0.41
Ndc1Q8VCB1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndc1Q8VCB1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndc1Q8VCB1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.6■□□□□ 0.41
Ndc1Q8VCB1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc1Q8VCB1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc1Q8VCB1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc1Q8VCB1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.6■□□□□ 0.41
Ndc1Q8VCB1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc1Q8VCB1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Ndc1Q8VCB1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.6■□□□□ 0.41
Ndc1Q8VCB1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc1Q8VCB1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.6■□□□□ 0.41
Ndc1Q8VCB1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc1Q8VCB1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ndc1Q8VCB1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Ndc1Q8VCB1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndc1Q8VCB1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc1Q8VCB1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc1Q8VCB1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc1Q8VCB1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc1Q8VCB1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.59■□□□□ 0.41
Ndc1Q8VCB1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc1Q8VCB1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc1Q8VCB1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc1Q8VCB1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc1Q8VCB1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ndc1Q8VCB1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc1Q8VCB1 Gm6211-202ENSMUST00000167849 925 ntBASIC17.59■□□□□ 0.41
Ndc1Q8VCB1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc1Q8VCB1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc1Q8VCB1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ndc1Q8VCB1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ndc1Q8VCB1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ndc1Q8VCB1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndc1Q8VCB1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Ndc1Q8VCB1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms