Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx2ipQ8VC66 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Ssx2ipQ8VC66 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ssx2ipQ8VC66 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssx2ipQ8VC66 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssx2ipQ8VC66 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ssx2ipQ8VC66 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Ssx2ipQ8VC66 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssx2ipQ8VC66 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssx2ipQ8VC66 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssx2ipQ8VC66 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ssx2ipQ8VC66 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssx2ipQ8VC66 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssx2ipQ8VC66 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssx2ipQ8VC66 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssx2ipQ8VC66 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssx2ipQ8VC66 Gm29257-201ENSMUST00000186115 639 ntBASIC19.15■□□□□ 0.66
Ssx2ipQ8VC66 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ssx2ipQ8VC66 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ssx2ipQ8VC66 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssx2ipQ8VC66 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssx2ipQ8VC66 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ssx2ipQ8VC66 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ssx2ipQ8VC66 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ssx2ipQ8VC66 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ssx2ipQ8VC66 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ssx2ipQ8VC66 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ssx2ipQ8VC66 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ssx2ipQ8VC66 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.14■□□□□ 0.65
Ssx2ipQ8VC66 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.14■□□□□ 0.65
Ssx2ipQ8VC66 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ssx2ipQ8VC66 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.14■□□□□ 0.65
Ssx2ipQ8VC66 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssx2ipQ8VC66 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ssx2ipQ8VC66 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssx2ipQ8VC66 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssx2ipQ8VC66 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssx2ipQ8VC66 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssx2ipQ8VC66 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssx2ipQ8VC66 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssx2ipQ8VC66 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssx2ipQ8VC66 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.13■□□□□ 0.65
Ssx2ipQ8VC66 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssx2ipQ8VC66 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ssx2ipQ8VC66 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ssx2ipQ8VC66 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ssx2ipQ8VC66 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ssx2ipQ8VC66 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx2ipQ8VC66 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx2ipQ8VC66 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx2ipQ8VC66 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ssx2ipQ8VC66 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx2ipQ8VC66 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Ssx2ipQ8VC66 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx2ipQ8VC66 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Ssx2ipQ8VC66 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx2ipQ8VC66 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx2ipQ8VC66 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx2ipQ8VC66 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx2ipQ8VC66 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.12■□□□□ 0.65
Ssx2ipQ8VC66 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssx2ipQ8VC66 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.12■□□□□ 0.65
Ssx2ipQ8VC66 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.11■□□□□ 0.65
Ssx2ipQ8VC66 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssx2ipQ8VC66 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ssx2ipQ8VC66 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssx2ipQ8VC66 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssx2ipQ8VC66 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.11■□□□□ 0.65
Ssx2ipQ8VC66 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.11■□□□□ 0.65
Ssx2ipQ8VC66 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.11■□□□□ 0.65
Ssx2ipQ8VC66 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ssx2ipQ8VC66 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssx2ipQ8VC66 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssx2ipQ8VC66 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ssx2ipQ8VC66 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ssx2ipQ8VC66 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssx2ipQ8VC66 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ssx2ipQ8VC66 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssx2ipQ8VC66 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.1■□□□□ 0.65
Ssx2ipQ8VC66 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssx2ipQ8VC66 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ssx2ipQ8VC66 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssx2ipQ8VC66 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssx2ipQ8VC66 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Ssx2ipQ8VC66 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssx2ipQ8VC66 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ssx2ipQ8VC66 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ssx2ipQ8VC66 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssx2ipQ8VC66 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssx2ipQ8VC66 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssx2ipQ8VC66 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssx2ipQ8VC66 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ssx2ipQ8VC66 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssx2ipQ8VC66 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssx2ipQ8VC66 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssx2ipQ8VC66 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Ssx2ipQ8VC66 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.09■□□□□ 0.65
Ssx2ipQ8VC66 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssx2ipQ8VC66 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssx2ipQ8VC66 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms