Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Top1mtQ8R4U6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC22.46■■□□□ 1.19
Top1mtQ8R4U6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Top1mtQ8R4U6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Top1mtQ8R4U6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Top1mtQ8R4U6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Top1mtQ8R4U6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC22.46■■□□□ 1.19
Top1mtQ8R4U6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.46■■□□□ 1.19
Top1mtQ8R4U6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.46■■□□□ 1.19
Top1mtQ8R4U6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Top1mtQ8R4U6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Top1mtQ8R4U6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Top1mtQ8R4U6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Top1mtQ8R4U6 Gm5112-201ENSMUST00000204407 2368 ntBASIC22.46■■□□□ 1.19
Top1mtQ8R4U6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Top1mtQ8R4U6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Top1mtQ8R4U6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Top1mtQ8R4U6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Top1mtQ8R4U6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Top1mtQ8R4U6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Top1mtQ8R4U6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.45■■□□□ 1.18
Top1mtQ8R4U6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.45■■□□□ 1.18
Top1mtQ8R4U6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Top1mtQ8R4U6 Gm38342-201ENSMUST00000195710 2980 ntBASIC22.45■■□□□ 1.18
Top1mtQ8R4U6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Top1mtQ8R4U6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Top1mtQ8R4U6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Top1mtQ8R4U6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Top1mtQ8R4U6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Top1mtQ8R4U6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Top1mtQ8R4U6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
Top1mtQ8R4U6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Top1mtQ8R4U6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Top1mtQ8R4U6 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.44■■□□□ 1.18
Top1mtQ8R4U6 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.44■■□□□ 1.18
Top1mtQ8R4U6 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.44■■□□□ 1.18
Top1mtQ8R4U6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC22.44■■□□□ 1.18
Top1mtQ8R4U6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Top1mtQ8R4U6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Top1mtQ8R4U6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Top1mtQ8R4U6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Top1mtQ8R4U6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Top1mtQ8R4U6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Top1mtQ8R4U6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Top1mtQ8R4U6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Top1mtQ8R4U6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Top1mtQ8R4U6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Top1mtQ8R4U6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Top1mtQ8R4U6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Top1mtQ8R4U6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
Top1mtQ8R4U6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.43■■□□□ 1.18
Top1mtQ8R4U6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Top1mtQ8R4U6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Top1mtQ8R4U6 Gm15853-202ENSMUST00000195518 2041 ntBASIC22.43■■□□□ 1.18
Top1mtQ8R4U6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Top1mtQ8R4U6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Top1mtQ8R4U6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Top1mtQ8R4U6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Top1mtQ8R4U6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Top1mtQ8R4U6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Top1mtQ8R4U6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Top1mtQ8R4U6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Top1mtQ8R4U6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
Top1mtQ8R4U6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Top1mtQ8R4U6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Top1mtQ8R4U6 Gm6627-201ENSMUST00000218299 2386 ntBASIC22.42■■□□□ 1.18
Top1mtQ8R4U6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Top1mtQ8R4U6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Top1mtQ8R4U6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Top1mtQ8R4U6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC22.41■■□□□ 1.18
Top1mtQ8R4U6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Top1mtQ8R4U6 Gm26971-201ENSMUST00000182423 1072 ntBASIC22.41■■□□□ 1.18
Top1mtQ8R4U6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.41■■□□□ 1.18
Top1mtQ8R4U6 Gm42778-201ENSMUST00000199644 553 ntBASIC22.41■■□□□ 1.18
Top1mtQ8R4U6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Top1mtQ8R4U6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Top1mtQ8R4U6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Top1mtQ8R4U6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Top1mtQ8R4U6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Top1mtQ8R4U6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Top1mtQ8R4U6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Top1mtQ8R4U6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Top1mtQ8R4U6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Top1mtQ8R4U6 Gm13534-201ENSMUST00000121169 513 ntBASIC22.39■■□□□ 1.17
Top1mtQ8R4U6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Top1mtQ8R4U6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.39■■□□□ 1.17
Top1mtQ8R4U6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Top1mtQ8R4U6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Top1mtQ8R4U6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Top1mtQ8R4U6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Top1mtQ8R4U6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Top1mtQ8R4U6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Top1mtQ8R4U6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Top1mtQ8R4U6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
Top1mtQ8R4U6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Top1mtQ8R4U6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Top1mtQ8R4U6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Top1mtQ8R4U6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.38■■□□□ 1.17
Top1mtQ8R4U6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Top1mtQ8R4U6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms