Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Cd109Q8R422 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
Cd109Q8R422 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Cd109Q8R422 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Cd109Q8R422 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cd109Q8R422 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cd109Q8R422 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Cd109Q8R422 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cd109Q8R422 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
Cd109Q8R422 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
Cd109Q8R422 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cd109Q8R422 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cd109Q8R422 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
Cd109Q8R422 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cd109Q8R422 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Cd109Q8R422 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Cd109Q8R422 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Cd109Q8R422 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Cd109Q8R422 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Cd109Q8R422 Gm13158-201ENSMUST00000122007 736 ntBASIC26.78■■□□□ 1.88
Cd109Q8R422 Gm6576-201ENSMUST00000169678 883 ntBASIC26.78■■□□□ 1.88
Cd109Q8R422 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC26.78■■□□□ 1.88
Cd109Q8R422 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC26.78■■□□□ 1.88
Cd109Q8R422 Arhgef33-211ENSMUST00000225658 473 ntBASIC26.78■■□□□ 1.88
Cd109Q8R422 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
Cd109Q8R422 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Cd109Q8R422 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Cd109Q8R422 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cd109Q8R422 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Cd109Q8R422 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cd109Q8R422 Gm715-201ENSMUST00000117865 831 ntBASIC26.77■■□□□ 1.88
Cd109Q8R422 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC26.77■■□□□ 1.88
Cd109Q8R422 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC26.77■■□□□ 1.88
Cd109Q8R422 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC26.77■■□□□ 1.88
Cd109Q8R422 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC26.77■■□□□ 1.88
Cd109Q8R422 Gm8309-201ENSMUST00000206627 1448 ntBASIC26.77■■□□□ 1.88
Cd109Q8R422 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Cd109Q8R422 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cd109Q8R422 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cd109Q8R422 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cd109Q8R422 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cd109Q8R422 AC124603.1-201ENSMUST00000223843 308 ntBASIC26.76■■□□□ 1.87
Cd109Q8R422 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Cd109Q8R422 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Cd109Q8R422 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Cd109Q8R422 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Cd109Q8R422 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC26.76■■□□□ 1.87
Cd109Q8R422 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Cd109Q8R422 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Cd109Q8R422 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC26.76■■□□□ 1.87
Cd109Q8R422 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Cd109Q8R422 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Cd109Q8R422 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC26.75■■□□□ 1.87
Cd109Q8R422 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Cd109Q8R422 Golph3-202ENSMUST00000226517 2359 ntBASIC26.74■■□□□ 1.87
Cd109Q8R422 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Cd109Q8R422 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC26.74■■□□□ 1.87
Cd109Q8R422 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC26.74■■□□□ 1.87
Cd109Q8R422 AC154649.1-201ENSMUST00000227392 384 ntBASIC26.74■■□□□ 1.87
Cd109Q8R422 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Cd109Q8R422 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Cd109Q8R422 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
Cd109Q8R422 Gm11927-201ENSMUST00000118472 759 ntBASIC26.73■■□□□ 1.87
Cd109Q8R422 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Cd109Q8R422 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC26.73■■□□□ 1.87
Cd109Q8R422 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Cd109Q8R422 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC26.73■■□□□ 1.87
Cd109Q8R422 Alkbh1-212ENSMUST00000185301 408 ntBASIC26.73■■□□□ 1.87
Cd109Q8R422 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Cd109Q8R422 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Cd109Q8R422 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Cd109Q8R422 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
Cd109Q8R422 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Cd109Q8R422 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Cd109Q8R422 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Cd109Q8R422 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Cd109Q8R422 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Cd109Q8R422 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Cd109Q8R422 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Cd109Q8R422 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
Cd109Q8R422 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Cd109Q8R422 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC26.71■■□□□ 1.87
Cd109Q8R422 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Cd109Q8R422 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Cd109Q8R422 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
Cd109Q8R422 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Cd109Q8R422 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Cd109Q8R422 Gm15378-201ENSMUST00000121894 207 ntBASIC26.7■■□□□ 1.86
Cd109Q8R422 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Cd109Q8R422 H2-K2-201ENSMUST00000174250 1049 ntBASIC26.7■■□□□ 1.86
Cd109Q8R422 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Cd109Q8R422 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Cd109Q8R422 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Cd109Q8R422 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Cd109Q8R422 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
Cd109Q8R422 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cd109Q8R422 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cd109Q8R422 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cd109Q8R422 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC26.69■■□□□ 1.86
Cd109Q8R422 AC158538.1-201ENSMUST00000225870 294 ntBASIC26.69■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms