Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slf1Q8R3P9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slf1Q8R3P9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slf1Q8R3P9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.9■□□□□ 0.62
Slf1Q8R3P9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slf1Q8R3P9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slf1Q8R3P9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.9■□□□□ 0.62
Slf1Q8R3P9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slf1Q8R3P9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.9■□□□□ 0.62
Slf1Q8R3P9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slf1Q8R3P9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Slf1Q8R3P9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Slf1Q8R3P9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Slf1Q8R3P9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slf1Q8R3P9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slf1Q8R3P9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slf1Q8R3P9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Slf1Q8R3P9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slf1Q8R3P9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Slf1Q8R3P9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slf1Q8R3P9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.89■□□□□ 0.61
Slf1Q8R3P9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Slf1Q8R3P9 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.89■□□□□ 0.61
Slf1Q8R3P9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slf1Q8R3P9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slf1Q8R3P9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slf1Q8R3P9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Slf1Q8R3P9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slf1Q8R3P9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slf1Q8R3P9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slf1Q8R3P9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
Slf1Q8R3P9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slf1Q8R3P9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slf1Q8R3P9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slf1Q8R3P9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slf1Q8R3P9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slf1Q8R3P9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Slf1Q8R3P9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Slf1Q8R3P9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slf1Q8R3P9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slf1Q8R3P9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slf1Q8R3P9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slf1Q8R3P9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slf1Q8R3P9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.87■□□□□ 0.61
Slf1Q8R3P9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.87■□□□□ 0.61
Slf1Q8R3P9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slf1Q8R3P9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Slf1Q8R3P9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slf1Q8R3P9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slf1Q8R3P9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slf1Q8R3P9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slf1Q8R3P9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slf1Q8R3P9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Slf1Q8R3P9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slf1Q8R3P9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slf1Q8R3P9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slf1Q8R3P9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slf1Q8R3P9 Mir6236-201ENSMUST00000184437 123 ntBASIC18.86■□□□□ 0.61
Slf1Q8R3P9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Slf1Q8R3P9 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.86■□□□□ 0.61
Slf1Q8R3P9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slf1Q8R3P9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slf1Q8R3P9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slf1Q8R3P9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slf1Q8R3P9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slf1Q8R3P9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Slf1Q8R3P9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.85■□□□□ 0.61
Slf1Q8R3P9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slf1Q8R3P9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Slf1Q8R3P9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slf1Q8R3P9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.84■□□□□ 0.61
Slf1Q8R3P9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slf1Q8R3P9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slf1Q8R3P9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slf1Q8R3P9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slf1Q8R3P9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slf1Q8R3P9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms