Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Arhgef33-211ENSMUST00000225658 473 ntBASIC24.08■■□□□ 1.45
Chmp7Q8R1T1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Chmp7Q8R1T1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Chmp7Q8R1T1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Chmp7Q8R1T1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Chmp7Q8R1T1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Chmp7Q8R1T1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Chmp7Q8R1T1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Chmp7Q8R1T1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Chmp7Q8R1T1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Chmp7Q8R1T1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Chmp7Q8R1T1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC24.07■■□□□ 1.44
Chmp7Q8R1T1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC24.07■■□□□ 1.44
Chmp7Q8R1T1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Chmp7Q8R1T1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC24.07■■□□□ 1.44
Chmp7Q8R1T1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Chmp7Q8R1T1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Chmp7Q8R1T1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Chmp7Q8R1T1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC24.06■■□□□ 1.44
Chmp7Q8R1T1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC24.06■■□□□ 1.44
Chmp7Q8R1T1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Chmp7Q8R1T1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Chmp7Q8R1T1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Chmp7Q8R1T1 Gm37352-201ENSMUST00000193908 2181 ntBASIC24.05■■□□□ 1.44
Chmp7Q8R1T1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Chmp7Q8R1T1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Chmp7Q8R1T1 Gm6576-201ENSMUST00000169678 883 ntBASIC24.05■■□□□ 1.44
Chmp7Q8R1T1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC24.05■■□□□ 1.44
Chmp7Q8R1T1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Chmp7Q8R1T1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Chmp7Q8R1T1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Chmp7Q8R1T1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Chmp7Q8R1T1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Chmp7Q8R1T1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Chmp7Q8R1T1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Chmp7Q8R1T1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Chmp7Q8R1T1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC24.04■■□□□ 1.44
Chmp7Q8R1T1 Gm29241-201ENSMUST00000189260 1096 ntBASIC24.04■■□□□ 1.44
Chmp7Q8R1T1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC24.04■■□□□ 1.44
Chmp7Q8R1T1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Chmp7Q8R1T1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Chmp7Q8R1T1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Chmp7Q8R1T1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
Chmp7Q8R1T1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Chmp7Q8R1T1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Chmp7Q8R1T1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Chmp7Q8R1T1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Chmp7Q8R1T1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Chmp7Q8R1T1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Chmp7Q8R1T1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Chmp7Q8R1T1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Chmp7Q8R1T1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC24.02■■□□□ 1.44
Chmp7Q8R1T1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Chmp7Q8R1T1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC24.02■■□□□ 1.44
Chmp7Q8R1T1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
Chmp7Q8R1T1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Chmp7Q8R1T1 Nrn1-203ENSMUST00000223611 1443 ntBASIC24.01■■□□□ 1.43
Chmp7Q8R1T1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Chmp7Q8R1T1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Chmp7Q8R1T1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Chmp7Q8R1T1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Chmp7Q8R1T1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Chmp7Q8R1T1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Chmp7Q8R1T1 Gm15847-201ENSMUST00000121417 1065 ntBASIC24.01■■□□□ 1.43
Chmp7Q8R1T1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC24.01■■□□□ 1.43
Chmp7Q8R1T1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Chmp7Q8R1T1 AC140264.2-202ENSMUST00000218746 817 ntBASIC24.01■■□□□ 1.43
Chmp7Q8R1T1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Chmp7Q8R1T1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Chmp7Q8R1T1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Chmp7Q8R1T1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Chmp7Q8R1T1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Chmp7Q8R1T1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Chmp7Q8R1T1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Chmp7Q8R1T1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Chmp7Q8R1T1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
Chmp7Q8R1T1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC24■■□□□ 1.43
Chmp7Q8R1T1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Chmp7Q8R1T1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Chmp7Q8R1T1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Chmp7Q8R1T1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC24■■□□□ 1.43
Chmp7Q8R1T1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC24■■□□□ 1.43
Chmp7Q8R1T1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC24■■□□□ 1.43
Chmp7Q8R1T1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC24■■□□□ 1.43
Chmp7Q8R1T1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Chmp7Q8R1T1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Chmp7Q8R1T1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Chmp7Q8R1T1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Chmp7Q8R1T1 Gm6277-202ENSMUST00000224036 2779 ntBASIC23.99■■□□□ 1.43
Chmp7Q8R1T1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Chmp7Q8R1T1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Chmp7Q8R1T1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Chmp7Q8R1T1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Chmp7Q8R1T1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Chmp7Q8R1T1 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.98■■□□□ 1.43
Chmp7Q8R1T1 AC154649.1-201ENSMUST00000227392 384 ntBASIC23.98■■□□□ 1.43
Chmp7Q8R1T1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Chmp7Q8R1T1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Chmp7Q8R1T1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Chmp7Q8R1T1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms