Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Nudcd3Q8R1N4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nudcd3Q8R1N4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nudcd3Q8R1N4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
Nudcd3Q8R1N4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.73■□□□□ 0.59
Nudcd3Q8R1N4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.73■□□□□ 0.59
Nudcd3Q8R1N4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nudcd3Q8R1N4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
Nudcd3Q8R1N4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nudcd3Q8R1N4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nudcd3Q8R1N4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nudcd3Q8R1N4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nudcd3Q8R1N4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nudcd3Q8R1N4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nudcd3Q8R1N4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nudcd3Q8R1N4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nudcd3Q8R1N4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Nudcd3Q8R1N4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nudcd3Q8R1N4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nudcd3Q8R1N4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nudcd3Q8R1N4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nudcd3Q8R1N4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nudcd3Q8R1N4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nudcd3Q8R1N4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nudcd3Q8R1N4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nudcd3Q8R1N4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nudcd3Q8R1N4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nudcd3Q8R1N4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nudcd3Q8R1N4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nudcd3Q8R1N4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nudcd3Q8R1N4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nudcd3Q8R1N4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nudcd3Q8R1N4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.69■□□□□ 0.58
Nudcd3Q8R1N4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nudcd3Q8R1N4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nudcd3Q8R1N4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nudcd3Q8R1N4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nudcd3Q8R1N4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nudcd3Q8R1N4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.69■□□□□ 0.58
Nudcd3Q8R1N4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.69■□□□□ 0.58
Nudcd3Q8R1N4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nudcd3Q8R1N4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nudcd3Q8R1N4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nudcd3Q8R1N4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nudcd3Q8R1N4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.69■□□□□ 0.58
Nudcd3Q8R1N4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nudcd3Q8R1N4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nudcd3Q8R1N4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nudcd3Q8R1N4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nudcd3Q8R1N4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.69■□□□□ 0.58
Nudcd3Q8R1N4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nudcd3Q8R1N4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nudcd3Q8R1N4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nudcd3Q8R1N4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nudcd3Q8R1N4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nudcd3Q8R1N4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nudcd3Q8R1N4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nudcd3Q8R1N4 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.68■□□□□ 0.58
Nudcd3Q8R1N4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nudcd3Q8R1N4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nudcd3Q8R1N4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nudcd3Q8R1N4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nudcd3Q8R1N4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nudcd3Q8R1N4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nudcd3Q8R1N4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nudcd3Q8R1N4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nudcd3Q8R1N4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nudcd3Q8R1N4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.67■□□□□ 0.58
Nudcd3Q8R1N4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nudcd3Q8R1N4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nudcd3Q8R1N4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nudcd3Q8R1N4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nudcd3Q8R1N4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Nudcd3Q8R1N4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nudcd3Q8R1N4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nudcd3Q8R1N4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nudcd3Q8R1N4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nudcd3Q8R1N4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nudcd3Q8R1N4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nudcd3Q8R1N4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms