Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.2■■□□□ 1.14
Atf7Q8R0S1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Atf7Q8R0S1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Atf7Q8R0S1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Atf7Q8R0S1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Atf7Q8R0S1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
Atf7Q8R0S1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Atf7Q8R0S1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Atf7Q8R0S1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.19■■□□□ 1.14
Atf7Q8R0S1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Atf7Q8R0S1 Gm10493-201ENSMUST00000097270 612 ntBASIC22.19■■□□□ 1.14
Atf7Q8R0S1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC22.19■■□□□ 1.14
Atf7Q8R0S1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Atf7Q8R0S1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Atf7Q8R0S1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Atf7Q8R0S1 Gm13234-201ENSMUST00000120010 747 ntBASIC22.18■■□□□ 1.14
Atf7Q8R0S1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atf7Q8R0S1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atf7Q8R0S1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atf7Q8R0S1 Gm38342-201ENSMUST00000195710 2980 ntBASIC22.17■■□□□ 1.14
Atf7Q8R0S1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Atf7Q8R0S1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
Atf7Q8R0S1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
Atf7Q8R0S1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atf7Q8R0S1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Atf7Q8R0S1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atf7Q8R0S1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atf7Q8R0S1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Atf7Q8R0S1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atf7Q8R0S1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Atf7Q8R0S1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC22.15■■□□□ 1.14
Atf7Q8R0S1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Atf7Q8R0S1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Atf7Q8R0S1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.15■■□□□ 1.14
Atf7Q8R0S1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Atf7Q8R0S1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Atf7Q8R0S1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Atf7Q8R0S1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.15■■□□□ 1.14
Atf7Q8R0S1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Atf7Q8R0S1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Atf7Q8R0S1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Atf7Q8R0S1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
Atf7Q8R0S1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Atf7Q8R0S1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Atf7Q8R0S1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Atf7Q8R0S1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Atf7Q8R0S1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Atf7Q8R0S1 Gm13534-201ENSMUST00000121169 513 ntBASIC22.14■■□□□ 1.13
Atf7Q8R0S1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC22.14■■□□□ 1.13
Atf7Q8R0S1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Atf7Q8R0S1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Atf7Q8R0S1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Atf7Q8R0S1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Atf7Q8R0S1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Atf7Q8R0S1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Atf7Q8R0S1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Atf7Q8R0S1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Atf7Q8R0S1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Atf7Q8R0S1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Atf7Q8R0S1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Atf7Q8R0S1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC22.13■■□□□ 1.13
Atf7Q8R0S1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Atf7Q8R0S1 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.13■■□□□ 1.13
Atf7Q8R0S1 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.13■■□□□ 1.13
Atf7Q8R0S1 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.13■■□□□ 1.13
Atf7Q8R0S1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Atf7Q8R0S1 Gm7856-201ENSMUST00000117514 1493 ntBASIC22.13■■□□□ 1.13
Atf7Q8R0S1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Atf7Q8R0S1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Atf7Q8R0S1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Atf7Q8R0S1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Atf7Q8R0S1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC22.12■■□□□ 1.13
Atf7Q8R0S1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Atf7Q8R0S1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.12■■□□□ 1.13
Atf7Q8R0S1 Gm26971-201ENSMUST00000182423 1072 ntBASIC22.12■■□□□ 1.13
Atf7Q8R0S1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Atf7Q8R0S1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Atf7Q8R0S1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Atf7Q8R0S1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.12■■□□□ 1.13
Atf7Q8R0S1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Atf7Q8R0S1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Atf7Q8R0S1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Atf7Q8R0S1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Atf7Q8R0S1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC22.11■■□□□ 1.13
Atf7Q8R0S1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Atf7Q8R0S1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
Atf7Q8R0S1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.11■■□□□ 1.13
Atf7Q8R0S1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
Atf7Q8R0S1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Atf7Q8R0S1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC22.1■■□□□ 1.13
Atf7Q8R0S1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.1■■□□□ 1.13
Atf7Q8R0S1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.1■■□□□ 1.13
Atf7Q8R0S1 Gm42778-201ENSMUST00000199644 553 ntBASIC22.1■■□□□ 1.13
Atf7Q8R0S1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Atf7Q8R0S1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Atf7Q8R0S1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Atf7Q8R0S1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Atf7Q8R0S1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC22.09■■□□□ 1.13
Atf7Q8R0S1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Atf7Q8R0S1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms