Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Sf3a1Q8K4Z5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
Sf3a1Q8K4Z5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sf3a1Q8K4Z5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sf3a1Q8K4Z5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sf3a1Q8K4Z5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Sf3a1Q8K4Z5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sf3a1Q8K4Z5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sf3a1Q8K4Z5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sf3a1Q8K4Z5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sf3a1Q8K4Z5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Sf3a1Q8K4Z5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sf3a1Q8K4Z5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC22.9■■□□□ 1.26
Sf3a1Q8K4Z5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC22.9■■□□□ 1.26
Sf3a1Q8K4Z5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sf3a1Q8K4Z5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC22.9■■□□□ 1.26
Sf3a1Q8K4Z5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Sf3a1Q8K4Z5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sf3a1Q8K4Z5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Sf3a1Q8K4Z5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Sf3a1Q8K4Z5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Sf3a1Q8K4Z5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC22.89■■□□□ 1.25
Sf3a1Q8K4Z5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Sf3a1Q8K4Z5 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.89■■□□□ 1.25
Sf3a1Q8K4Z5 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Sf3a1Q8K4Z5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Sf3a1Q8K4Z5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
Sf3a1Q8K4Z5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Sf3a1Q8K4Z5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC22.89■■□□□ 1.25
Sf3a1Q8K4Z5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Sf3a1Q8K4Z5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Sf3a1Q8K4Z5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sf3a1Q8K4Z5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Sf3a1Q8K4Z5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Sf3a1Q8K4Z5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Sf3a1Q8K4Z5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sf3a1Q8K4Z5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sf3a1Q8K4Z5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sf3a1Q8K4Z5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Sf3a1Q8K4Z5 Nespas-201ENSMUST00000143738 1083 ntBASIC22.88■■□□□ 1.25
Sf3a1Q8K4Z5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC22.88■■□□□ 1.25
Sf3a1Q8K4Z5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC22.88■■□□□ 1.25
Sf3a1Q8K4Z5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC22.88■■□□□ 1.25
Sf3a1Q8K4Z5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Sf3a1Q8K4Z5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Sf3a1Q8K4Z5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sf3a1Q8K4Z5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sf3a1Q8K4Z5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
Sf3a1Q8K4Z5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sf3a1Q8K4Z5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sf3a1Q8K4Z5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sf3a1Q8K4Z5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sf3a1Q8K4Z5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sf3a1Q8K4Z5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.86■■□□□ 1.25
Sf3a1Q8K4Z5 Gm37179-201ENSMUST00000194862 823 ntBASIC22.86■■□□□ 1.25
Sf3a1Q8K4Z5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sf3a1Q8K4Z5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sf3a1Q8K4Z5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sf3a1Q8K4Z5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sf3a1Q8K4Z5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC22.86■■□□□ 1.25
Sf3a1Q8K4Z5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Sf3a1Q8K4Z5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sf3a1Q8K4Z5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sf3a1Q8K4Z5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Sf3a1Q8K4Z5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sf3a1Q8K4Z5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Sf3a1Q8K4Z5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sf3a1Q8K4Z5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC22.85■■□□□ 1.25
Sf3a1Q8K4Z5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Sf3a1Q8K4Z5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sf3a1Q8K4Z5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sf3a1Q8K4Z5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sf3a1Q8K4Z5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Sf3a1Q8K4Z5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Sf3a1Q8K4Z5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC22.84■■□□□ 1.25
Sf3a1Q8K4Z5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sf3a1Q8K4Z5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Sf3a1Q8K4Z5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Sf3a1Q8K4Z5 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sf3a1Q8K4Z5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC22.84■■□□□ 1.25
Sf3a1Q8K4Z5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sf3a1Q8K4Z5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC22.84■■□□□ 1.25
Sf3a1Q8K4Z5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Sf3a1Q8K4Z5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC22.84■■□□□ 1.25
Sf3a1Q8K4Z5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC22.84■■□□□ 1.25
Sf3a1Q8K4Z5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sf3a1Q8K4Z5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
Sf3a1Q8K4Z5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sf3a1Q8K4Z5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.84■■□□□ 1.25
Sf3a1Q8K4Z5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sf3a1Q8K4Z5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sf3a1Q8K4Z5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sf3a1Q8K4Z5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sf3a1Q8K4Z5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sf3a1Q8K4Z5 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC22.83■■□□□ 1.25
Sf3a1Q8K4Z5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC22.83■■□□□ 1.25
Sf3a1Q8K4Z5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sf3a1Q8K4Z5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Sf3a1Q8K4Z5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Sf3a1Q8K4Z5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms