Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col23a1Q8K4G2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col23a1Q8K4G2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col23a1Q8K4G2 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.04■■□□□ 1.28
Col23a1Q8K4G2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col23a1Q8K4G2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Col23a1Q8K4G2 Gm6345-202ENSMUST00000180900 204 ntBASIC23.04■■□□□ 1.28
Col23a1Q8K4G2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col23a1Q8K4G2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC23.03■■□□□ 1.28
Col23a1Q8K4G2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col23a1Q8K4G2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Col23a1Q8K4G2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col23a1Q8K4G2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col23a1Q8K4G2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col23a1Q8K4G2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col23a1Q8K4G2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col23a1Q8K4G2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col23a1Q8K4G2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col23a1Q8K4G2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col23a1Q8K4G2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC23.02■■□□□ 1.28
Col23a1Q8K4G2 Gm42545-201ENSMUST00000202755 922 ntBASIC23.02■■□□□ 1.28
Col23a1Q8K4G2 Gm18025-201ENSMUST00000221733 862 ntBASIC23.02■■□□□ 1.28
Col23a1Q8K4G2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col23a1Q8K4G2 Gm7712-202ENSMUST00000222331 1510 ntBASIC23.02■■□□□ 1.28
Col23a1Q8K4G2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col23a1Q8K4G2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.01■■□□□ 1.27
Col23a1Q8K4G2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Col23a1Q8K4G2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col23a1Q8K4G2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC23.01■■□□□ 1.27
Col23a1Q8K4G2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC23.01■■□□□ 1.27
Col23a1Q8K4G2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Col23a1Q8K4G2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC23■■□□□ 1.27
Col23a1Q8K4G2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Col23a1Q8K4G2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC23■■□□□ 1.27
Col23a1Q8K4G2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Col23a1Q8K4G2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC23■■□□□ 1.27
Col23a1Q8K4G2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC23■■□□□ 1.27
Col23a1Q8K4G2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC23■■□□□ 1.27
Col23a1Q8K4G2 Timm23-208ENSMUST00000226683 750 ntBASIC23■■□□□ 1.27
Col23a1Q8K4G2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC23■■□□□ 1.27
Col23a1Q8K4G2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
Col23a1Q8K4G2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col23a1Q8K4G2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col23a1Q8K4G2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Col23a1Q8K4G2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC22.99■■□□□ 1.27
Col23a1Q8K4G2 Gm33142-201ENSMUST00000193913 867 ntBASIC22.99■■□□□ 1.27
Col23a1Q8K4G2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col23a1Q8K4G2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col23a1Q8K4G2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Col23a1Q8K4G2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Col23a1Q8K4G2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.99■■□□□ 1.27
Col23a1Q8K4G2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.98■■□□□ 1.27
Col23a1Q8K4G2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col23a1Q8K4G2 Gm10013-201ENSMUST00000106074 672 ntBASIC22.98■■□□□ 1.27
Col23a1Q8K4G2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col23a1Q8K4G2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Col23a1Q8K4G2 Gm37292-201ENSMUST00000192062 758 ntBASIC22.98■■□□□ 1.27
Col23a1Q8K4G2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC22.98■■□□□ 1.27
Col23a1Q8K4G2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col23a1Q8K4G2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col23a1Q8K4G2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col23a1Q8K4G2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Col23a1Q8K4G2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col23a1Q8K4G2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC22.97■■□□□ 1.27
Col23a1Q8K4G2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col23a1Q8K4G2 Gm10138-203ENSMUST00000206952 366 ntBASIC22.97■■□□□ 1.27
Col23a1Q8K4G2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Col23a1Q8K4G2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col23a1Q8K4G2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC22.97■■□□□ 1.27
Col23a1Q8K4G2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col23a1Q8K4G2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col23a1Q8K4G2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Col23a1Q8K4G2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col23a1Q8K4G2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col23a1Q8K4G2 Gm14464-201ENSMUST00000119658 1254 ntBASIC22.96■■□□□ 1.27
Col23a1Q8K4G2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Col23a1Q8K4G2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Col23a1Q8K4G2 Zfp783-201ENSMUST00000095946 670 ntBASIC22.96■■□□□ 1.27
Col23a1Q8K4G2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Col23a1Q8K4G2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Col23a1Q8K4G2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Col23a1Q8K4G2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC22.96■■□□□ 1.27
Col23a1Q8K4G2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col23a1Q8K4G2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col23a1Q8K4G2 Gm9103-201ENSMUST00000119371 405 ntBASIC22.95■■□□□ 1.26
Col23a1Q8K4G2 AA414768-201ENSMUST00000121924 1257 ntBASIC22.95■■□□□ 1.26
Col23a1Q8K4G2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col23a1Q8K4G2 Ank2-226ENSMUST00000189368 339 ntBASIC22.95■■□□□ 1.26
Col23a1Q8K4G2 Gm45560-201ENSMUST00000211492 1472 ntBASIC22.95■■□□□ 1.26
Col23a1Q8K4G2 AC159205.6-201ENSMUST00000224935 887 ntBASIC22.95■■□□□ 1.26
Col23a1Q8K4G2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col23a1Q8K4G2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col23a1Q8K4G2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col23a1Q8K4G2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Col23a1Q8K4G2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Col23a1Q8K4G2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Col23a1Q8K4G2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Col23a1Q8K4G2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Col23a1Q8K4G2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC22.94■■□□□ 1.26
Col23a1Q8K4G2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.94■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms