Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clrn1Q8K445 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clrn1Q8K445 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clrn1Q8K445 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.69■□□□□ 0.42
Clrn1Q8K445 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clrn1Q8K445 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clrn1Q8K445 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.68■□□□□ 0.42
Clrn1Q8K445 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Clrn1Q8K445 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Clrn1Q8K445 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn1Q8K445 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn1Q8K445 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn1Q8K445 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn1Q8K445 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn1Q8K445 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn1Q8K445 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn1Q8K445 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn1Q8K445 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn1Q8K445 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.67■□□□□ 0.42
Clrn1Q8K445 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn1Q8K445 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Clrn1Q8K445 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn1Q8K445 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn1Q8K445 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn1Q8K445 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn1Q8K445 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Clrn1Q8K445 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn1Q8K445 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn1Q8K445 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.67■□□□□ 0.42
Clrn1Q8K445 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.67■□□□□ 0.42
Clrn1Q8K445 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.67■□□□□ 0.42
Clrn1Q8K445 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn1Q8K445 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn1Q8K445 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn1Q8K445 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn1Q8K445 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn1Q8K445 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn1Q8K445 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn1Q8K445 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn1Q8K445 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Clrn1Q8K445 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn1Q8K445 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn1Q8K445 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn1Q8K445 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Clrn1Q8K445 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn1Q8K445 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn1Q8K445 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn1Q8K445 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn1Q8K445 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn1Q8K445 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn1Q8K445 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn1Q8K445 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.65■□□□□ 0.42
Clrn1Q8K445 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn1Q8K445 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn1Q8K445 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn1Q8K445 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.65■□□□□ 0.42
Clrn1Q8K445 Gm18284-201ENSMUST00000172604 624 ntBASIC17.65■□□□□ 0.42
Clrn1Q8K445 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.65■□□□□ 0.42
Clrn1Q8K445 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.65■□□□□ 0.42
Clrn1Q8K445 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn1Q8K445 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn1Q8K445 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn1Q8K445 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Clrn1Q8K445 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clrn1Q8K445 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clrn1Q8K445 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Clrn1Q8K445 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn1Q8K445 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn1Q8K445 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn1Q8K445 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.64■□□□□ 0.41
Clrn1Q8K445 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn1Q8K445 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn1Q8K445 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Clrn1Q8K445 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn1Q8K445 Gm42642-201ENSMUST00000200683 355 ntBASIC17.64■□□□□ 0.41
Clrn1Q8K445 Gm18671-201ENSMUST00000214826 683 ntBASIC17.64■□□□□ 0.41
Clrn1Q8K445 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn1Q8K445 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn1Q8K445 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.64■□□□□ 0.41
Clrn1Q8K445 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn1Q8K445 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn1Q8K445 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn1Q8K445 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn1Q8K445 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn1Q8K445 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn1Q8K445 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Clrn1Q8K445 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn1Q8K445 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
Clrn1Q8K445 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn1Q8K445 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn1Q8K445 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn1Q8K445 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.63■□□□□ 0.41
Clrn1Q8K445 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn1Q8K445 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn1Q8K445 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn1Q8K445 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn1Q8K445 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Clrn1Q8K445 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn1Q8K445 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn1Q8K445 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms