Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cchcr1Q8K2I2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.15■■□□□ 1.14
Cchcr1Q8K2I2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cchcr1Q8K2I2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Cchcr1Q8K2I2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cchcr1Q8K2I2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cchcr1Q8K2I2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cchcr1Q8K2I2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cchcr1Q8K2I2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cchcr1Q8K2I2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cchcr1Q8K2I2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC22.15■■□□□ 1.14
Cchcr1Q8K2I2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cchcr1Q8K2I2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Cchcr1Q8K2I2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Cchcr1Q8K2I2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Cchcr1Q8K2I2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cchcr1Q8K2I2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC22.14■■□□□ 1.13
Cchcr1Q8K2I2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Cchcr1Q8K2I2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.14■■□□□ 1.13
Cchcr1Q8K2I2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Cchcr1Q8K2I2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Cchcr1Q8K2I2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cchcr1Q8K2I2 Gm15853-202ENSMUST00000195518 2041 ntBASIC22.14■■□□□ 1.13
Cchcr1Q8K2I2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cchcr1Q8K2I2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cchcr1Q8K2I2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cchcr1Q8K2I2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cchcr1Q8K2I2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Cchcr1Q8K2I2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cchcr1Q8K2I2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cchcr1Q8K2I2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cchcr1Q8K2I2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.13■■□□□ 1.13
Cchcr1Q8K2I2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.13■■□□□ 1.13
Cchcr1Q8K2I2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cchcr1Q8K2I2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cchcr1Q8K2I2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cchcr1Q8K2I2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cchcr1Q8K2I2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cchcr1Q8K2I2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cchcr1Q8K2I2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cchcr1Q8K2I2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cchcr1Q8K2I2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cchcr1Q8K2I2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.12■■□□□ 1.13
Cchcr1Q8K2I2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Cchcr1Q8K2I2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cchcr1Q8K2I2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cchcr1Q8K2I2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cchcr1Q8K2I2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Cchcr1Q8K2I2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Cchcr1Q8K2I2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cchcr1Q8K2I2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cchcr1Q8K2I2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cchcr1Q8K2I2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cchcr1Q8K2I2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC22.11■■□□□ 1.13
Cchcr1Q8K2I2 Gm43060-201ENSMUST00000200621 289 ntBASIC22.11■■□□□ 1.13
Cchcr1Q8K2I2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cchcr1Q8K2I2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cchcr1Q8K2I2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cchcr1Q8K2I2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cchcr1Q8K2I2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cchcr1Q8K2I2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cchcr1Q8K2I2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cchcr1Q8K2I2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cchcr1Q8K2I2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC22.1■■□□□ 1.13
Cchcr1Q8K2I2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cchcr1Q8K2I2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cchcr1Q8K2I2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cchcr1Q8K2I2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22.1■■□□□ 1.13
Cchcr1Q8K2I2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cchcr1Q8K2I2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cchcr1Q8K2I2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
Cchcr1Q8K2I2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cchcr1Q8K2I2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Cchcr1Q8K2I2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cchcr1Q8K2I2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cchcr1Q8K2I2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC22.09■■□□□ 1.13
Cchcr1Q8K2I2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cchcr1Q8K2I2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cchcr1Q8K2I2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Cchcr1Q8K2I2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Cchcr1Q8K2I2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.09■■□□□ 1.13
Cchcr1Q8K2I2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cchcr1Q8K2I2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cchcr1Q8K2I2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cchcr1Q8K2I2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cchcr1Q8K2I2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cchcr1Q8K2I2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cchcr1Q8K2I2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cchcr1Q8K2I2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cchcr1Q8K2I2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Cchcr1Q8K2I2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC22.08■■□□□ 1.13
Cchcr1Q8K2I2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.13
Cchcr1Q8K2I2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.08■■□□□ 1.13
Cchcr1Q8K2I2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Cchcr1Q8K2I2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22.08■■□□□ 1.13
Cchcr1Q8K2I2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cchcr1Q8K2I2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cchcr1Q8K2I2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cchcr1Q8K2I2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Cchcr1Q8K2I2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms