Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim68Q8K243 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim68Q8K243 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim68Q8K243 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim68Q8K243 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim68Q8K243 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim68Q8K243 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.26■□□□□ 0.83
Trim68Q8K243 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.26■□□□□ 0.83
Trim68Q8K243 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim68Q8K243 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Trim68Q8K243 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim68Q8K243 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.25■□□□□ 0.83
Trim68Q8K243 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim68Q8K243 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Trim68Q8K243 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim68Q8K243 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trim68Q8K243 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.25■□□□□ 0.83
Trim68Q8K243 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trim68Q8K243 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim68Q8K243 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trim68Q8K243 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim68Q8K243 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Trim68Q8K243 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim68Q8K243 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim68Q8K243 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim68Q8K243 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim68Q8K243 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim68Q8K243 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim68Q8K243 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim68Q8K243 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim68Q8K243 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim68Q8K243 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim68Q8K243 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Trim68Q8K243 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Trim68Q8K243 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim68Q8K243 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim68Q8K243 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim68Q8K243 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim68Q8K243 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim68Q8K243 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim68Q8K243 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim68Q8K243 Gm27275-201ENSMUST00000184318 272 ntBASIC20.23■□□□□ 0.83
Trim68Q8K243 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.23■□□□□ 0.83
Trim68Q8K243 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim68Q8K243 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim68Q8K243 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim68Q8K243 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim68Q8K243 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim68Q8K243 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim68Q8K243 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim68Q8K243 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Trim68Q8K243 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim68Q8K243 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Trim68Q8K243 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim68Q8K243 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.22■□□□□ 0.83
Trim68Q8K243 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim68Q8K243 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim68Q8K243 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim68Q8K243 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim68Q8K243 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim68Q8K243 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim68Q8K243 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Trim68Q8K243 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim68Q8K243 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim68Q8K243 Gm26524-201ENSMUST00000192339 390 ntBASIC20.21■□□□□ 0.83
Trim68Q8K243 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim68Q8K243 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim68Q8K243 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trim68Q8K243 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.21■□□□□ 0.83
Trim68Q8K243 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim68Q8K243 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Trim68Q8K243 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Trim68Q8K243 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Trim68Q8K243 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim68Q8K243 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim68Q8K243 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim68Q8K243 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim68Q8K243 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Trim68Q8K243 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim68Q8K243 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim68Q8K243 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim68Q8K243 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim68Q8K243 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim68Q8K243 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim68Q8K243 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim68Q8K243 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim68Q8K243 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim68Q8K243 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim68Q8K243 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Trim68Q8K243 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim68Q8K243 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim68Q8K243 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Trim68Q8K243 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim68Q8K243 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim68Q8K243 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim68Q8K243 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim68Q8K243 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Trim68Q8K243 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.19■□□□□ 0.82
Trim68Q8K243 Gm13836-201ENSMUST00000121159 501 ntBASIC20.19■□□□□ 0.82
Trim68Q8K243 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms